DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18249 and LOC5666884

DIOPT Version :10

Sequence 1:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_001687925.2 Gene:LOC5666884 / 5666884 VectorBaseID:AGAMI1_008415 Length:466 Species:Anopheles gambiae


Alignment Length:231 Identity:68/231 - (29%)
Similarity:106/231 - (45%) Gaps:32/231 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   215 MPDVLGSLPNL------RLLDLGHAAELEVMTLNLTNVQNLVLEGSSLSSLVINGGFIKLQAGNN 273
            :|.|...||:|      |:|: |..|.|.|.......|:.|.|||..:.|:.:...|.:|:..||
Mosquito    41 LPTVDSELPDLSKRTTVRILE-GSLANLTVKLAEKLPVRILWLEGLDIQSVYVAPHFEELRLRNN 104

  Fly   274 ELNHLQVGNKS----SVIEMDLHGNLLNGNDTAALLRGMWNLQRLDLSKNRIEALPQHGSGLDAS 334
            :|..|:....|    ::..:|:..||||.....|.|.|   |:.|.|.:||...|          
Mosquito   105 KLVTLETSASSTSSYALKVLDVSKNLLNNATQLAPLHG---LEELYLDENRFTEL---------- 156

  Fly   335 GTQELLILPS---LKFLNLANNQLVRL-PPESPILSSRLSYLDLSHNLMLTLDVAILRSLSVLKG 395
               .:.:|..   |:.|:.|.|.||:| ||.|.::.:.|:.|.|:||.:.::.:...: |..|:.
Mosquito   157 ---SMAVLEKMARLRILSAARNGLVKLAPPTSALVLNDLTTLSLAHNRLASVSMENWQ-LPSLQT 217

  Fly   396 LYVEGNRLNTINYQKLHEEHPDLSELGLHDNPWSSG 431
            |.:..|.|..::.....|...||.:|.|..|.||.|
Mosquito   218 LLLSDNSLAEVDGLDGFERFFDLQKLELAGNRWSCG 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380
LRR 105..433 CDD:443914 68/231 (29%)
leucine-rich repeat 105..128 CDD:275380
leucine-rich repeat 129..152 CDD:275380
leucine-rich repeat 153..176 CDD:275380
leucine-rich repeat 177..200 CDD:275380
leucine-rich repeat 201..224 CDD:275380 3/8 (38%)
leucine-rich repeat 225..258 CDD:275380 12/38 (32%)
leucine-rich repeat 259..310 CDD:275380 15/54 (28%)
leucine-rich repeat 311..344 CDD:275380 7/32 (22%)
leucine-rich repeat 345..368 CDD:275380 10/23 (43%)
leucine-rich repeat 369..390 CDD:275380 5/20 (25%)
leucine-rich repeat 393..417 CDD:275380 5/23 (22%)
LOC5666884XP_001687925.2 None
Blue background indicates that the domain is not in the aligned region.

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