DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18249 and LOC563710

DIOPT Version :10

Sequence 1:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_692159.4 Gene:LOC563710 / 563710 -ID:- Length:635 Species:Danio rerio


Alignment Length:529 Identity:124/529 - (23%)
Similarity:218/529 - (41%) Gaps:134/529 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 RNC----ATYHISKESLRPV-ENLT----SLQMQGTSLGVLRDQIFNAVPRLEILQLSQNFIHTV 142
            |:|    ...:....:.|.| :||:    .|.::..||..|:...|..:.:|..|.|..|:|..|
Zfish    33 RSCRCDGKIVYCESSAFRDVPKNLSGGCQGLSLRYNSLASLKAGQFVGLNQLIWLYLDHNYIANV 97

  Fly   143 HVAAFQGLSKLRLLGLQGNAIAEILSSTLDPLMELVHLDLSRNELTTLPQNIFAKNKKLQTLLLN 207
            ...||||:.:|:.|.|..|.|..:.::|...:..|.:||||.|:|..|....|...:||.:|.:.
Zfish    98 DARAFQGIRRLKELILSSNKITLLHNTTFHLVPNLRNLDLSYNKLQALQPGQFQGLRKLLSLHMR 162

  Fly   208 GNPLRILMPDVLGSLPNLRLLDLGHAAELEVMTLNLTNVQNLVLEGSSLSSLVINGGFIKLQAGN 272
            .|.|:.|...:.....||..||||: ..|..:|.|            |:|      |.:||    
Zfish   163 SNSLKNLPSRLFQDCRNLEFLDLGY-NRLRSITRN------------SMS------GLLKL---- 204

  Fly   273 NELNHLQVGNKSSVIEM-------DLHGNLLNGNDTAALLRG---MW-NLQRLDLSKNRIEALPQ 326
            .|| |:: .|:.|.|..       :|....|..|....:..|   || :||:||||.|.::.   
Zfish   205 TEL-HIE-HNQFSKINFFNFPRFYNLRALYLQWNRIRTMSEGLTWMWTSLQKLDLSGNDLQE--- 264

  Fly   327 HGSGLDASGTQELLILPSLKFLNLANNQLVRLPPESPILSSRLSYLDLSHNL-----MLTLDVAI 386
                :||   :....:|:|:.|||.:|:||.:..|:....:.|:.:.|:.|:     ::...||.
Zfish   265 ----IDA---EVYRAMPNLQTLNLDSNKLVNVSQEAVDAWTSLTAISLAGNMWDCGPVVCPLVAW 322

  Fly   387 LRSLSVLKGL--------YVEGNR-LNTINYQKLHEEHPDL-SELGLHDNPWSSGLYRKMFLYFT 441
            :|:....|.:        .|:|.: |:.::...:....|.. |.:.:...|         |:.|:
Zfish   323 MRTFRGNKEINMICASPKEVQGEKVLDAVDANGVCRIAPATPSTIFVPSTP---------FVAFS 378

  Fly   442 DRGVH-----LQARPQNRVLNKS---------SRVDIDWPPNEGQAEAQKMDPPG----VTGIHP 488
            .....     |::....||...|         |:.|:  ||.|     |..:|..    |.|   
Zfish   379 QTPASSLVPTLKSGDSRRVHGTSLEGSTSSVPSQPDV--PPQE-----QDFEPVSFHKIVAG--- 433

  Fly   489 YWTLRDILAFVTLLVVMIILLMNLYHILEEEGCLRRFRHWRR----SRTLGQNTSTTRNSGRRLD 549
                 .:..|:::.::::::.::                |:|    .:.|.:|::..|.  ||..
Zfish   434 -----SVALFLSVAMILLVIYVS----------------WKRYPSSVKQLQENSAAARK--RRKK 475

  Fly   550 EQDSEQSSS 558
            .:::|::.|
Zfish   476 SRETERTLS 484

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380
LRR 105..433 CDD:443914 94/357 (26%)
leucine-rich repeat 105..128 CDD:275380 6/26 (23%)
leucine-rich repeat 129..152 CDD:275380 10/22 (45%)
leucine-rich repeat 153..176 CDD:275380 6/22 (27%)
leucine-rich repeat 177..200 CDD:275380 9/22 (41%)
leucine-rich repeat 201..224 CDD:275380 5/22 (23%)
leucine-rich repeat 225..258 CDD:275380 9/32 (28%)
leucine-rich repeat 259..310 CDD:275380 15/61 (25%)
leucine-rich repeat 311..344 CDD:275380 9/32 (28%)
leucine-rich repeat 345..368 CDD:275380 8/22 (36%)
leucine-rich repeat 369..390 CDD:275380 6/25 (24%)
leucine-rich repeat 393..417 CDD:275380 4/32 (13%)
LOC563710XP_692159.4 leucine-rich repeat 60..83 CDD:275380 5/22 (23%)
LRR 63..>308 CDD:443914 82/279 (29%)
leucine-rich repeat 84..107 CDD:275380 10/22 (45%)
leucine-rich repeat 108..131 CDD:275380 6/22 (27%)
leucine-rich repeat 132..155 CDD:275380 9/22 (41%)
leucine-rich repeat 156..179 CDD:275380 5/22 (23%)
leucine-rich repeat 180..203 CDD:275380 11/41 (27%)
leucine-rich repeat 204..227 CDD:275380 7/28 (25%)
leucine-rich repeat 228..251 CDD:275380 6/22 (27%)
leucine-rich repeat 252..275 CDD:275380 9/32 (28%)
Blue background indicates that the domain is not in the aligned region.

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