DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18249 and CG7896

DIOPT Version :10

Sequence 1:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_651754.1 Gene:CG7896 / 43552 FlyBaseID:FBgn0039728 Length:1392 Species:Drosophila melanogaster


Alignment Length:627 Identity:149/627 - (23%)
Similarity:234/627 - (37%) Gaps:192/627 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    47 VAYSATPALQ-------------------LRELHLRNCSRQSITWLVLQLTPG------------ 80
            ||.:|.|.|:                   :|.|...:.||.:||    .:|||            
  Fly   298 VALAAVPGLKHLNLSSNMLQQLDYTHMQVVRSLESLDISRNTIT----TITPGTFREMGALKYLD 358

  Fly    81 -------------------LRTLVIRNCATYHISKESLRPVENLTSLQMQGTSLGVLRDQIFNAV 126
                               |:||:|::.....:...:|..:..|||||:....:..|..:|..::
  Fly   359 LSLNSLRTIEDDALEGLDSLQTLIIKDNNILLVPGSALGRLPQLTSLQLDYNRVAALSAEILGSL 423

  Fly   127 PRLEI--LQLSQNFIHTVHVAAFQGLSKLRLLGLQGNAIAEI-------LSSTLDPLM------- 175
            ...:|  |.||:|.|..:...:||..|.|..|.|.||::|.|       |.|||..|.       
  Fly   424 QAGDITTLSLSRNVIRELPPGSFQMFSSLHTLDLSGNSLAVINADTFAGLESTLMALKLSQNRLT 488

  Fly   176 ----------ELVHLDLSRNELTTLPQNIFAKNKKLQTLLLNGNPLRILMPDVLGSLPNLRLLDL 230
                      ||..||||.|.||.||..||.:.:.:|:|.|:||.|..|...:...|..|:::||
  Fly   489 GLGGAPWVLPELRSLDLSGNTLTELPSTIFEELENVQSLNLSGNHLTPLTGALFKPLDRLQVIDL 553

  Fly   231 GHAAELEVMTLNLTNVQNLVLEG-SSLSSLVINGGFIKLQAGNNELNHLQVG---NKSSVIEMDL 291
            ...        |:..:...:|.| ..|..:.:|         :|:|..||.|   |..::..:||
  Fly   554 SGC--------NIRQISGDLLAGLQDLKHIYLN---------DNQLQELQDGSFVNLWNISSIDL 601

  Fly   292 HGNLLNGNDTAALLRGMWNLQRLDLSKNRIEALP----QHGSG---LDASGTQELLILPS----- 344
            ..|.:....:.|.:..| .||:|||..|::.|..    ..|:|   ||.|..|...:.||     
  Fly   602 SNNRIGSIRSGAFVNVM-KLQKLDLHGNQLSAFKGEYFNTGTGIEELDISDNQLSYLFPSSFRIH 665

  Fly   345 --LKFLNLANNQLVRLPPESPILSSRLSYL---DLSHNLMLTLDVAILRSLSVLKGLYVEGNRLN 404
              |:.:..|||:....|.|   |.|.|.||   |||||.:.|::......|..|:.|.|..|:|:
  Fly   666 PRLREIRAANNKFSFFPAE---LISTLQYLEHIDLSHNQLKTIEELDFARLPRLRVLLVANNQLD 727

  Fly   405 TINYQKLHEE---------HPDLSELG--------------LHDN---PWSSGLYRKMFL----- 438
            .::....|..         |.:|..:|              |..|   ..|.|::.:..|     
  Fly   728 MVSEMAFHNSTQLQILDLAHNNLDRIGERTFEGLVRLEQLNLEGNRLSELSDGVFERTKLQMLEN 792

  Fly   439 -------------------YFTDRGVHL------QARPQNRVLNKSSRVDIDWPPNEGQAEAQKM 478
                               :|....|.|      :....:.::....|:|:.:.|...:|....:
  Fly   793 INLAHNRFEYAPLNALQRQFFFVSSVDLSHNKIKELPGDDSIMVNIKRIDLSFNPLSSKAVHNVL 857

  Fly   479 DPPGVTGIHPYWTLRDI------LAFVTLLVVMIILLMNLYH 514
            :.|.        |:|::      :..:.||....:..:||.|
  Fly   858 NEPK--------TVRELSLAGTGIENLELLETPFLQFLNLSH 891

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380 7/22 (32%)
LRR 105..433 CDD:443914 114/400 (29%)
leucine-rich repeat 105..128 CDD:275380 7/22 (32%)
leucine-rich repeat 129..152 CDD:275380 8/24 (33%)
leucine-rich repeat 153..176 CDD:275380 12/46 (26%)
leucine-rich repeat 177..200 CDD:275380 12/22 (55%)
leucine-rich repeat 201..224 CDD:275380 8/22 (36%)
leucine-rich repeat 225..258 CDD:275380 7/33 (21%)
leucine-rich repeat 259..310 CDD:275380 12/53 (23%)
leucine-rich repeat 311..344 CDD:275380 13/39 (33%)
leucine-rich repeat 345..368 CDD:275380 7/22 (32%)
leucine-rich repeat 369..390 CDD:275380 9/23 (39%)
leucine-rich repeat 393..417 CDD:275380 7/32 (22%)
CG7896NP_651754.1 PRK15370 20..>410 CDD:185268 24/115 (21%)
leucine-rich repeat 109..132 CDD:275380
leucine-rich repeat 133..161 CDD:275380
leucine-rich repeat 162..185 CDD:275380
leucine-rich repeat 186..209 CDD:275380
leucine-rich repeat 210..233 CDD:275380
leucine-rich repeat 234..257 CDD:275380
PLN00113 237..>750 CDD:215061 127/476 (27%)
leucine-rich repeat 258..281 CDD:275380
leucine-rich repeat 282..329 CDD:275380 5/30 (17%)
leucine-rich repeat 330..353 CDD:275380 8/26 (31%)
leucine-rich repeat 354..377 CDD:275380 0/22 (0%)
leucine-rich repeat 378..401 CDD:275380 5/22 (23%)
leucine-rich repeat 402..425 CDD:275380 7/22 (32%)
leucine-rich repeat 428..451 CDD:275380 8/22 (36%)
leucine-rich repeat 452..473 CDD:275380 7/20 (35%)
leucine-rich repeat 477..497 CDD:275378 2/19 (11%)
leucine-rich repeat 500..523 CDD:275380 12/22 (55%)
leucine-rich repeat 524..547 CDD:275380 8/22 (36%)
leucine-rich repeat 548..571 CDD:275380 6/30 (20%)
leucine-rich repeat 572..595 CDD:275380 8/31 (26%)
leucine-rich repeat 596..619 CDD:275380 5/23 (22%)
leucine-rich repeat 620..643 CDD:275380 8/22 (36%)
leucine-rich repeat 644..667 CDD:275380 6/22 (27%)
leucine-rich repeat 668..691 CDD:275380 9/25 (36%)
LRR <684..1020 CDD:443914 42/219 (19%)
leucine-rich repeat 692..715 CDD:275380 8/22 (36%)
leucine-rich repeat 716..739 CDD:275380 6/22 (27%)
leucine-rich repeat 740..761 CDD:275380 3/20 (15%)
leucine-rich repeat 764..789 CDD:275380 5/24 (21%)
leucine-rich repeat 790..810 CDD:275380 0/19 (0%)
leucine-rich repeat 818..850 CDD:275380 5/31 (16%)
leucine-rich repeat 863..883 CDD:275378 3/19 (16%)
leucine-rich repeat 884..907 CDD:275380 3/8 (38%)
leucine-rich repeat 908..933 CDD:275380
leucine-rich repeat 934..955 CDD:275380
leucine-rich repeat 958..982 CDD:275380
leucine-rich repeat 983..1055 CDD:275380
leucine-rich repeat 1009..1033 CDD:275380
leucine-rich repeat 1058..1085 CDD:275380
LRRCT 1121..1168 CDD:214507
Blue background indicates that the domain is not in the aligned region.

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