DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18249 and CG7800

DIOPT Version :9

Sequence 1:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster


Alignment Length:561 Identity:202/561 - (36%)
Similarity:295/561 - (52%) Gaps:48/561 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly    14 LTVSDALAVYDASGRFNLSASCPDSFCSLSDRPVAYSATPALQLRELHLRNCSRQSITWLVLQLT 78
            |.:...||...|.||.:|...|.||:|.|..|...:|...|.:|.|.|:.:|.::     ||:|.
  Fly     3 LIIIALLASVSALGRPDLEDYCNDSYCHLLGRSRTFSDKKATKLTEFHMDSCEKK-----VLKLM 62

  Fly    79 PGLRTLVIRNCATYHISKESLRPVENLTSLQMQGTSLGVLRDQIFNAVPRLEILQLSQNFIHTVH 143
            |.||||.:.||.:...:...|..:..|||||::..:|..|.|:.|:..|.::||.|..|.|..:.
  Fly    63 PNLRTLELENCDSPDFTMNDLNQLPYLTSLQLRRGNLLGLHDEHFSKWPNMKILMLGGNNITRLS 127

  Fly   144 VAAFQGLSKLRLLGLQGNAIAEILSSTLDPLMELVHLDLSRNELTTLPQNIFAKNKKLQTLLLNG 208
            ...|:||::|.||.|.||.|..:.......|.||:|||||.|.:.||.:|||....||:.|||||
  Fly   128 NECFKGLAQLWLLSLPGNGIQGLPWDVFQNLPELLHLDLSGNRIETLHENIFTGVPKLEMLLLNG 192

  Fly   209 NPLRILMPDVLGSLPNLRLLDLGHAAELEVMTLNLTNVQNLVLEGSSLSSLVINGGFIKLQAGNN 273
            |||..:.|..|.||.||||||:.:...|.  .|:|.....|:|:.|.:..|.|.|...||||..|
  Fly   193 NPLTWIAPTSLKSLSNLRLLDMSNCGPLP--DLSLPGAHTLILDNSGVQRLDILGSVHKLQARKN 255

  Fly   274 ELNHLQVGNKSSVIEMDLHGNLLNGNDTAALLRGMWNLQRLDLSKNRIEALPQHGSGLDASGTQE 338
            .:..:::.:||||||:|||.|||...|...||.|||.|||||||:|.|......||    ..|.|
  Fly   256 HITEIKLPDKSSVIELDLHSNLLTATDIPKLLTGMWRLQRLDLSENIIGIYAAAGS----DNTSE 316

  Fly   339 LLILPSLKFLNLANNQLVRLPPESPILSSRLSYLDLSHN-LMLTLDVAILRSLSVLKGLYVEGNR 402
            |.|||:|.::||:.|:|.||..:|||...||::||.|:| :.....|.|..:.: |:.|::|||.
  Fly   317 LFILPNLMYMNLSANRLTRLHFDSPIPWERLTHLDASYNRIYAPAKVGIDEAFN-LQSLHLEGNY 380

  Fly   403 LNTINYQKL-HEEHPDLSELGLHDNPWSSGLYRKMFLYFTDRGVHLQARPQNRVLNKSSRV---- 462
            :|  |::.. .:.||.|.|:.|:||.:....|:.:..:|.:.||::..:.|....|.::..    
  Fly   381 IN--NFELTPWKPHPSLKEVALYDNKFQPKGYKNITKFFNEIGVNVLEKTQYSQSNNTTPTCKPC 443

  Fly   463 --DI-DWPPNEGQAEAQKMDPPGVTGIHP------YWTLRDILAFVTLLVVMIILLMNLYHILEE 518
              |. |:|.:......|.:|    |.::|      .|.:.::|..|:|:|   .|.:|.:.|:: 
  Fly   444 IPDARDFPTSISADTNQTID----TKVNPLSNDTYQWNVWNVLMLVSLIV---SLFVNSFLIVK- 500

  Fly   519 EGCLRRFRHWRRSRTLGQNTSTTRNSGRRLDEQDSEQSSSE 559
               |.|.|        |:|..|..:|...:.|..|.:|..|
  Fly   501 ---LIRLR--------GRNQFTQSSSVPAIIEMFSNESDDE 530

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380 7/22 (32%)
LRR_8 104..163 CDD:290566 24/58 (41%)
leucine-rich repeat 105..128 CDD:275380 9/22 (41%)
LRR_RI 107..438 CDD:238064 139/332 (42%)
leucine-rich repeat 129..152 CDD:275380 8/22 (36%)
leucine-rich repeat 153..176 CDD:275380 8/22 (36%)
LRR_8 176..232 CDD:290566 33/55 (60%)
leucine-rich repeat 177..200 CDD:275380 12/22 (55%)
leucine-rich repeat 201..224 CDD:275380 13/22 (59%)
leucine-rich repeat 225..258 CDD:275380 11/32 (34%)
leucine-rich repeat 259..310 CDD:275380 25/50 (50%)
leucine-rich repeat 311..344 CDD:275380 16/32 (50%)
LRR_8 343..403 CDD:290566 24/60 (40%)
leucine-rich repeat 345..368 CDD:275380 10/22 (45%)
leucine-rich repeat 369..390 CDD:275380 7/21 (33%)
leucine-rich repeat 393..417 CDD:275380 8/24 (33%)
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380 7/22 (32%)
leucine-rich repeat 65..85 CDD:275380 7/19 (37%)
LRR_8 87..147 CDD:290566 24/59 (41%)
leucine-rich repeat 89..112 CDD:275380 9/22 (41%)
leucine-rich repeat 113..136 CDD:275380 8/22 (36%)
LRR_RI <131..334 CDD:238064 97/208 (47%)
leucine-rich repeat 137..160 CDD:275380 8/22 (36%)
LRR_8 140..195 CDD:290566 27/54 (50%)
leucine-rich repeat 161..184 CDD:275380 12/22 (55%)
leucine-rich repeat 185..208 CDD:275380 13/22 (59%)
leucine-rich repeat 209..246 CDD:275380 13/38 (34%)
leucine-rich repeat 247..267 CDD:275380 6/19 (32%)
leucine-rich repeat 268..292 CDD:275380 14/23 (61%)
leucine-rich repeat 293..322 CDD:275380 16/32 (50%)
leucine-rich repeat 395..406 CDD:275378 5/10 (50%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45443093
Domainoid 1 1.000 66 1.000 Domainoid score I16949
eggNOG 1 0.900 - - E33208_3C6YN
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0014314
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.740

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