DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18249 and CG6749

DIOPT Version :9

Sequence 1:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_648354.1 Gene:CG6749 / 39144 FlyBaseID:FBgn0036040 Length:552 Species:Drosophila melanogaster


Alignment Length:458 Identity:116/458 - (25%)
Similarity:191/458 - (41%) Gaps:93/458 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 YSATPALQLRELHLRNC---------------------SRQSITWLVLQLTPGLRTLVIRNCATY 92
            :|..|  .||:|:|..|                     |...:..|.......||.|:..|.:..
  Fly   100 FSILP--NLRQLNLSGCGLVDIRGNHFAPESALQRIDFSHNQMELLDRDFFGNLRKLIYANFSHN 162

  Fly    93 HISKESLRPVENLTSLQMQGTSLGVLRDQIFNAVPRLEILQLSQNFIHTVHVAAFQGLSKLRLLG 157
            .:.:..|..:..|..|::....   |.:..|...|:|:.|.|:.|.:..:.|.||:||..|..|.
  Fly   163 ALKQCDLPHMPLLNRLELGHNR---LVNATFGVCPQLQELILNDNQLIQLDVNAFRGLHGLLELQ 224

  Fly   158 LQGNAIAEILSSTLDPLMELVHLDLSRNELTTLPQNIFAKNKK----LQTLLLNGNPLRILMPDV 218
            |.||.::.|...|..||.:|..|:||:|.|..|..|:|...:.    ||.|.|:||.:|:|..:.
  Fly   225 LSGNRLSSIGLETFQPLAQLRKLNLSQNALDALRPNVFGAVQNFVLHLQQLDLSGNRIRLLFDNQ 289

  Fly   219 LGSLPNLRLLDLGHAAELEVMTLNLTNVQNLVLEGSSLSSL-----VINGGFIKLQAGNNELNHL 278
            ...|..|::||:..                     :|::||     |..|...||....|.:..:
  Fly   290 FRVLARLQMLDVSR---------------------NSIASLSPAHFVGLGSLRKLYLQYNAILEI 333

  Fly   279 QVGNKSSVIEMDL----HGNL------LNGNDTAALLRGMWNLQRLDLSKNRIEALPQHGSGLDA 333
            :....::::.:|.    :.||      :.|.:|...:|      ||:|:.||::.|  |.....:
  Fly   334 KPATFAALLNLDTLDLSYNNLEFLEEQIFGGNTLPRMR------RLNLNGNRMKHL--HPLAFSS 390

  Fly   334 SGTQELLILPSLKFLNLANNQLVRLPPESPILSSRLSYLDLSHNLMLTLDVAILRSLSVLKGLYV 398
                    ||.|::|.|.:|:|..|.........||..|.|.|||:..:::.:|.|||.::.:.|
  Fly   391 --------LPFLEYLKLGHNELKSLDVRMFAPMRRLQKLHLGHNLLEEINLDVLESLSSVQEILV 447

  Fly   399 EGNRLNTINYQKLHEEHPDLSELGLHDNPWSSGLYRKM--------FLYFTDR-GVHLQARPQNR 454
            :.|||..:  .|::...|:|..:.:..|||....:.|:        .:|..|. |.:...||...
  Fly   448 DNNRLTFL--AKVNVSFPNLKRVAIEGNPWQCPCFVKLQHWLATRDVVYLRDNTGYYKGERPLCI 510

  Fly   455 VLN 457
            |.|
  Fly   511 VTN 513

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380 7/43 (16%)
LRR_8 104..163 CDD:290566 19/58 (33%)
leucine-rich repeat 105..128 CDD:275380 4/22 (18%)
LRR_RI 107..438 CDD:238064 94/357 (26%)
leucine-rich repeat 129..152 CDD:275380 9/22 (41%)
leucine-rich repeat 153..176 CDD:275380 9/22 (41%)
LRR_8 176..232 CDD:290566 21/59 (36%)
leucine-rich repeat 177..200 CDD:275380 9/22 (41%)
leucine-rich repeat 201..224 CDD:275380 9/22 (41%)
leucine-rich repeat 225..258 CDD:275380 4/32 (13%)
leucine-rich repeat 259..310 CDD:275380 12/65 (18%)
leucine-rich repeat 311..344 CDD:275380 8/32 (25%)
LRR_8 343..403 CDD:290566 20/59 (34%)
leucine-rich repeat 345..368 CDD:275380 6/22 (27%)
leucine-rich repeat 369..390 CDD:275380 7/20 (35%)
leucine-rich repeat 393..417 CDD:275380 5/23 (22%)
CG6749NP_648354.1 LRR_RI 103..>256 CDD:238064 42/157 (27%)
LRR_8 104..164 CDD:290566 12/61 (20%)
leucine-rich repeat 106..129 CDD:275380 5/22 (23%)
leucine-rich repeat 130..153 CDD:275380 3/22 (14%)
leucine-rich repeat 154..195 CDD:275380 7/43 (16%)
LRR_RI 194..455 CDD:238064 84/297 (28%)
LRR_8 194..254 CDD:290566 24/59 (41%)
leucine-rich repeat 196..219 CDD:275380 9/22 (41%)
leucine-rich repeat 220..243 CDD:275380 9/22 (41%)
leucine-rich repeat 244..267 CDD:275380 9/22 (41%)
LRR_8 271..330 CDD:290566 20/79 (25%)
leucine-rich repeat 272..295 CDD:275380 9/22 (41%)
leucine-rich repeat 296..319 CDD:275380 7/43 (16%)
LRR_8 319..380 CDD:290566 13/66 (20%)
leucine-rich repeat 320..343 CDD:275380 3/22 (14%)
leucine-rich repeat 344..369 CDD:275380 5/24 (21%)
LRR_8 368..428 CDD:290566 22/75 (29%)
leucine-rich repeat 370..393 CDD:275380 9/38 (24%)
leucine-rich repeat 394..417 CDD:275380 6/22 (27%)
leucine-rich repeat 418..441 CDD:275380 9/22 (41%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45453598
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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