DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18249 and CG4168

DIOPT Version :10

Sequence 1:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_609740.4 Gene:CG4168 / 34889 FlyBaseID:FBgn0028888 Length:1330 Species:Drosophila melanogaster


Alignment Length:657 Identity:145/657 - (22%)
Similarity:246/657 - (37%) Gaps:173/657 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MHFYKYILLGICGLTVSDALAVYDASGRFNLSASCPDSFCSLSDRPVAYSATPALQLR---ELHL 62
            :|..||:.|      .|:.::      :.|...|..::...||.....:|..|.|.|:   :|..
  Fly   434 LHHLKYLYL------TSNQIS------QLNNLPSFTENLRVLSLSGNNFSMIPVLGLKNYTQLSY 486

  Fly    63 RNCSRQSIT------WLVLQLTPGLRTLVIRNCATYHISKESLRPVENLTSLQMQGTSLGVLRDQ 121
            .|....|||      :.|......|:|:::||....|:...|...:|.:..:.:....:.:....
  Fly   487 LNMGYNSITDIPEGIFAVDSWGSNLQTILLRNNKITHLHLGSFAGLEQIQEISLSFNDITIHHPL 551

  Fly   122 IFNAVPR-LEILQLS------QNFIHTVHVAAFQGLSKLRLLGLQGNAIAEILSSTLDPLMELVH 179
            :|..|.| |:||:||      ::......:.|...||:|..|||..|.:.::.:.:...:.||.:
  Fly   552 VFENVSRTLKILELSFAVFPARSLESLDPLDALLPLSQLIWLGLDNNNLKQVSNESFAQMRELSY 616

  Fly   180 LDLSRNELTTLPQNIFAKNK--------------------------KLQTLLLNGNPLRILMPDV 218
            ::||.|:|.|||:.:|..:.                          .||||.|..|.||.:....
  Fly   617 INLSFNQLKTLPRGLFQSDAHSHLVEIDLSYNGLERLEAQTFHSLGDLQTLNLQSNRLRTIARHA 681

  Fly   219 LGSLPNLRLLDLGHAAELEV----MTLNLTNVQNLVLEGSSLSSLVINGGFIKLQAGNNEL---- 275
            ..:|..||.|||.:...:.:    .|: |.|:..|.|..:.|.||.:. .|:.:......|    
  Fly   682 FHNLEFLRYLDLSYNRLVNISHGAFTV-LPNLAALDLMHNQLCSLSLK-SFLYVSNTTTPLRLNV 744

  Fly   276 --NHL-----QVGNKSSVIEMDLHGNLLNGNDTAALLRGMWNLQRLDLSKNRIEALPQHGSGLDA 333
              ||:     ::.:...:.::|:..|.:..:|:...|..  .|:.|:|:.|::.:|..|..|   
  Fly   745 SHNHIASFYDELSSYMYIYQLDISHNHVTKSDSFTNLAN--TLRFLNLAHNQLGSLQSHAFG--- 804

  Fly   334 SGTQELLILPSLKFLNLANNQLVRLPPESPILSSRLSYLDLSHNLMLTLDVAILRSLSVLKGLYV 398
                   .|..|:.||:|:|.|..|...|....:.|..||||||.:..|.|....:|..|:.|.:
  Fly   805 -------DLEFLEILNVAHNNLTSLRRRSFQGLNSLQELDLSHNQLDQLQVEQFSNLRKLRILRI 862

  Fly   399 EGNRL---------NT-INYQKLHEEH------PDLSELGL--------HDNPWSSGLYRKMFLY 439
            ..|||         || :.:..:.|..      |..:::|.        |:|           |.
  Fly   863 NSNRLRALPREVFMNTRLEFLDIAENQLSVWPVPAFTDIGFTLRSIQMSHNN-----------LE 916

  Fly   440 FTDRGVHLQAR-------PQNRV----------LNKSSRVDIDWPPNEGQAEAQKMDPPGVTGIH 487
            :.|..:.:.::       .:||:          ||..:.:|:.             ..|.||   
  Fly   917 YLDASMFINSQFLYDISLARNRITILPDNTFSFLNNLTNLDLS-------------QNPLVT--- 965

  Fly   488 PYWTLRDILAFVTLLVVMIILLMNLYHI--------------------LEEEGCLRRFRHWRRSR 532
              ..||::......|..:.:..|.||.:                    |...|.||..||...|.
  Fly   966 --TNLREVFVHTPRLRKLSLHHMGLYVLPPLKLPLLSYLDVSGNYLQELSPLGSLRHLRHVNVSH 1028

  Fly   533 TLGQNTS 539
            ....|.|
  Fly  1029 NKLTNAS 1035

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380 7/31 (23%)
LRR 105..433 CDD:443914 94/399 (24%)
leucine-rich repeat 105..128 CDD:275380 2/22 (9%)
leucine-rich repeat 129..152 CDD:275380 7/28 (25%)
leucine-rich repeat 153..176 CDD:275380 5/22 (23%)
leucine-rich repeat 177..200 CDD:275380 9/48 (19%)
leucine-rich repeat 201..224 CDD:275380 9/22 (41%)
leucine-rich repeat 225..258 CDD:275380 11/36 (31%)
leucine-rich repeat 259..310 CDD:275380 9/61 (15%)
leucine-rich repeat 311..344 CDD:275380 8/32 (25%)
leucine-rich repeat 345..368 CDD:275380 8/22 (36%)
leucine-rich repeat 369..390 CDD:275380 9/20 (45%)
leucine-rich repeat 393..417 CDD:275380 8/39 (21%)
CG4168NP_609740.4 PRK15370 <69..>353 CDD:185268
leucine-rich repeat 99..118 CDD:275380
leucine-rich repeat 122..146 CDD:275380
leucine-rich repeat 147..170 CDD:275380
leucine-rich repeat 171..194 CDD:275380
leucine-rich repeat 195..214 CDD:275380
leucine-rich repeat 215..236 CDD:275380
leucine-rich repeat 266..287 CDD:275380
leucine-rich repeat 288..311 CDD:275380
leucine-rich repeat 312..338 CDD:275380
LRR <338..651 CDD:443914 52/228 (23%)
leucine-rich repeat 339..365 CDD:275380
leucine-rich repeat 366..388 CDD:275380
leucine-rich repeat 389..412 CDD:275380
leucine-rich repeat 414..436 CDD:275380 0/1 (0%)
leucine-rich repeat 437..459 CDD:275380 6/33 (18%)
leucine-rich repeat 460..483 CDD:275380 6/22 (27%)
leucine-rich repeat 484..510 CDD:275380 6/25 (24%)
leucine-rich repeat 511..534 CDD:275380 6/22 (27%)
leucine-rich repeat 535..589 CDD:275380 10/53 (19%)
LRR 543..971 CDD:443914 106/470 (23%)
leucine-rich repeat 590..613 CDD:275380 5/22 (23%)
leucine-rich repeat 614..639 CDD:275380 9/24 (38%)
leucine-rich repeat 640..663 CDD:275380 0/22 (0%)
leucine-rich repeat 664..687 CDD:275380 9/22 (41%)
leucine-rich repeat 688..711 CDD:275380 7/23 (30%)
leucine-rich repeat 712..735 CDD:275380 6/23 (26%)
leucine-rich repeat 740..783 CDD:275380 7/42 (17%)
leucine-rich repeat 785..808 CDD:275380 8/32 (25%)
leucine-rich repeat 809..832 CDD:275380 8/22 (36%)
leucine-rich repeat 833..856 CDD:275380 10/22 (45%)
leucine-rich repeat 857..879 CDD:275380 6/21 (29%)
leucine-rich repeat 880..900 CDD:275380 2/19 (11%)
leucine-rich repeat 905..928 CDD:275380 4/33 (12%)
LRR 911..>1203 CDD:443914 27/154 (18%)
leucine-rich repeat 929..952 CDD:275380 3/22 (14%)
leucine-rich repeat 953..977 CDD:275380 6/41 (15%)
leucine-rich repeat 978..1020 CDD:275380 7/41 (17%)
leucine-rich repeat 1045..1068 CDD:275380
leucine-rich repeat 1069..1090 CDD:275380
leucine-rich repeat 1091..1114 CDD:275380
leucine-rich repeat 1115..1161 CDD:275380
leucine-rich repeat 1162..1190 CDD:275380
PCC 1230..>1298 CDD:188093
Blue background indicates that the domain is not in the aligned region.

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