DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG18249 and lron-9

DIOPT Version :9

Sequence 1:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_001076615.1 Gene:lron-9 / 172529 WormBaseID:WBGene00011971 Length:653 Species:Caenorhabditis elegans


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380
LRR_8 104..163 CDD:290566
leucine-rich repeat 105..128 CDD:275380
LRR_RI 107..438 CDD:238064
leucine-rich repeat 129..152 CDD:275380
leucine-rich repeat 153..176 CDD:275380
LRR_8 176..232 CDD:290566
leucine-rich repeat 177..200 CDD:275380
leucine-rich repeat 201..224 CDD:275380
leucine-rich repeat 225..258 CDD:275380
leucine-rich repeat 259..310 CDD:275380
leucine-rich repeat 311..344 CDD:275380
LRR_8 343..403 CDD:290566
leucine-rich repeat 345..368 CDD:275380
leucine-rich repeat 369..390 CDD:275380
leucine-rich repeat 393..417 CDD:275380
lron-9NP_001076615.1 leucine-rich repeat 137..159 CDD:275380
LRR_8 159..217 CDD:290566
leucine-rich repeat 160..183 CDD:275380
leucine-rich repeat 184..207 CDD:275380
leucine-rich repeat 208..232 CDD:275380
LRR_8 233..292 CDD:290566
leucine-rich repeat 233..257 CDD:275380
LRR_RI 234..456 CDD:238064
leucine-rich repeat 258..281 CDD:275380
LRR_8 280..340 CDD:290566
leucine-rich repeat 282..305 CDD:275380
leucine-rich repeat 306..329 CDD:275380
LRR_8 328..410 CDD:290566
leucine-rich repeat 330..375 CDD:275380
leucine-rich repeat 376..399 CDD:275380
LRR_8 398..457 CDD:290566
leucine-rich repeat 400..420 CDD:275380
leucine-rich repeat 425..447 CDD:275380
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

Return to query results.
Submit another query.