DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18249 and LOC1270056

DIOPT Version :10

Sequence 1:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_308718.5 Gene:LOC1270056 / 1270056 VectorBaseID:AGAMI1_004893 Length:571 Species:Anopheles gambiae


Alignment Length:523 Identity:124/523 - (23%)
Similarity:208/523 - (39%) Gaps:102/523 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 ELHLRNCSRQSITWLVLQLTPGLRTLVIRNCATYHISKESLRP--------------------VE 103
            |..:|:|:...:|             |:.:.|....|.|..||                    ..
Mosquito    35 EYTVRHCTLHGVT-------------VVHDAADIDFSSEYPRPYWFDFQHSQMDEIPRALFTTFP 86

  Fly   104 NLTSLQMQGTSLGVLRDQIFNAVPRLEILQLSQNFIHTVHVAAFQGLSKLRLLGLQGNAIAEILS 168
            .:.::..:.|.:..:....|....:|..|.|.:|.:.:::...|:|..:|..|.|..|.:.|:.:
Mosquito    87 EMQTIDFRETGIENINKFTFENAKQLRHLFLRRNKLTSLNNFIFKGCDRLEWLDLSHNQLQEVRN 151

  Fly   169 STLDPLMELVHLDLSRNELTTLPQNIFAKNKKLQTLLLNGNPLRILMPDVLGSLPNLRLLDLGHA 233
            .|...:..|..|||:.|.||.||:.:|.:..:|..|.||.|.|.:              ||....
Mosquito   152 KTFHDIRTLTRLDLNHNRLTVLPEEVFWELPELAHLSLNDNQLVV--------------LDRETF 202

  Fly   234 AELEVMTLNLT--------------NVQNLVLEGSSLSSLVINGGFIKLQAGNNELNHLQVGNKS 284
            ....:::|||.              :.|.:.|.|:.|:|:.|....:::...:|.|..:.|...:
Mosquito   203 FHSRIVSLNLNFNRLREVHMVDRFQSWQRVHLRGNQLTSVEIPPVPVEIDVSHNNLTTILVSYSN 267

  Fly   285 SVIE-MDLHGNLLNGNDTAALLRGMWNLQRLDLSKNRIEALPQHGSGLDASGTQELLILPSLKFL 348
            .::| :||..||.......:.|.   .|..||:|.|.:::||          ....|.:..|..|
Mosquito   268 ILVESLDLSHNLFADISNVSALN---FLHTLDVSFNALQSLP----------LTTFLKMKQLARL 319

  Fly   349 NLANNQLVRLPPESPILSSRLSYLDLSHNLMLTLDVAILRSLSVLKGLYVEGNRLNTINYQKLHE 413
            ||....|..|........|.|::||:|.|.:.|:|:.:|.:.:.|:.|:::||.|.::.|.:|..
Mosquito   320 NLEATNLTTLVHGLFSQQSNLTWLDVSFNRLQTIDLTVLTAAAKLEHLHIDGNNLTSVGYGRLPA 384

  Fly   414 EHPDLSELGLHDNPWSSGLYRKMFLYFTDRGVH------LQARPQNRVLNKSSRVDIDWPPNEG- 471
            ..|.|:.|||..|.|:..       |..|. ||      :...||     ||....:|....:| 
Mosquito   385 MFPSLTYLGLFANAWNCS-------YLVDL-VHFCRQHSINVAPQ-----KSYGTTLDASNVQGI 436

  Fly   472 -QAEAQKMDPPGVTGI-HPYWTLRDI--LAFVTLLVVMIILLMNLYHILEEEGCLRRFRHWRRSR 532
             ...:|....|.||.| ||..|....  |:...||.:|..:......:::|   :.|..|.|.:.
Mosquito   437 YCKSSQSTVLPVVTPIEHPIDTAPPSAELSIDRLLEMMQEMNKTTEQLVQE---MMRALHQRATG 498

  Fly   533 TLG 535
            .:|
Mosquito   499 AIG 501

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380 4/20 (20%)
LRR 105..433 CDD:443914 87/342 (25%)
leucine-rich repeat 105..128 CDD:275380 2/22 (9%)
leucine-rich repeat 129..152 CDD:275380 6/22 (27%)
leucine-rich repeat 153..176 CDD:275380 6/22 (27%)
leucine-rich repeat 177..200 CDD:275380 10/22 (45%)
leucine-rich repeat 201..224 CDD:275380 6/22 (27%)
leucine-rich repeat 225..258 CDD:275380 9/46 (20%)
leucine-rich repeat 259..310 CDD:275380 10/51 (20%)
leucine-rich repeat 311..344 CDD:275380 8/32 (25%)
leucine-rich repeat 345..368 CDD:275380 6/22 (27%)
leucine-rich repeat 369..390 CDD:275380 8/20 (40%)
leucine-rich repeat 393..417 CDD:275380 7/23 (30%)
LOC1270056XP_308718.5 None

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