DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18249 and LOC1270053

DIOPT Version :10

Sequence 1:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_308715.5 Gene:LOC1270053 / 1270053 VectorBaseID:AGAMI1_004829 Length:937 Species:Anopheles gambiae


Alignment Length:461 Identity:107/461 - (23%)
Similarity:175/461 - (37%) Gaps:111/461 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    36 PDSFCSLSD-----------RPVAYSATPALQ-LRELHLRNCSRQSI----TWLVLQLTPGLRTL 84
            |::|.||..           ..|...|..||. |:.|.:.|...:|:    .:|.|   ..|::|
Mosquito    82 PNAFASLKALTNLNLDNNLFATVPREALSALSTLKTLSIANNLLESLDDGDVFLSL---ARLQSL 143

  Fly    85 VIRNCATYHISKESLRPVENLTSLQMQGTSLGVLRDQIFNAVPRLEILQLSQNFIHTVHVAAFQG 149
            .:.:...:.:..:|...:..|..|.:....|......|.....:|::|.||.|:::.::|:.|..
Mosquito   144 SLDSNLIHQLHPQSFARLAELKLLNVSWNRLTAFESIILPPENQLQVLDLSYNYVNLLNVSTFHR 208

  Fly   150 LSKLRLLGLQGNAIAEILSSTLDPLMELVHLDLSRNELTTLPQNIFAKNKKLQTLLLNGNPLRIL 214
            |..||.|.|.||....:..:|...|..|..||||.|...:||..:|..|:||..|.|..|     
Mosquito   209 LPALRELSLAGNQFESLHPNTFATLRHLSRLDLSDNFFQSLPPRLFTSNRKLAELNLAAN----- 268

  Fly   215 MPDVLGSLPNLRLLDLGHAAELEVMTLNLTNVQNLVL-EGSSLSSLVINGGFIK------LQAG- 271
               :|.:||......|.|...|.:....||.:...:. |....:.|.:.|..|:      |||. 
Mosquito   269 ---LLDTLPGDLFAGLKHLTALNLRNNRLTELPATIFREQPPFAQLALEGNRIERFPSDWLQASA 330

  Fly   272 -----NNELNHLQ----------------VGNKSSVIEMDLHGNLLNGNDTAALLRGMWNLQRLD 315
                 ||.|..|:                .||:.:.:|.|             :.|.:..|:.|.
Mosquito   331 DLLLQNNRLAGLRKFAPSANGTVVRRLFLYGNEIATVEQD-------------VFRAVPKLETLY 382

  Fly   316 LSKNRIEAL------PQHGSGLDASGTQELLILPSLKFLNLANNQLVRLPPESPILSSRLSYLDL 374
            |..|||:.|      ..|                .|:.:.|::|:|..|...:....:||..:||
Mosquito   383 LDYNRIDELSPMVFHTNH----------------ELQHVTLSHNRLAVLRTNTFAGLARLHSVDL 431

  Fly   375 SHNLMLTLDVAILRSLSVLKGLYVEGNRLNTINYQKLHEEHPDLSELGLHDNPWSSGLYRKMFLY 439
            |:|.:..::.::... |.::.|.:.||||.|:                   :.||....|.::||
Mosquito   432 SYNRLAAIEESVFHG-SPVEYLNLNGNRLRTL-------------------DEWSFSGTRLLYLY 476

  Fly   440 FTDRGV 445
            .....:
Mosquito   477 VDSNAI 482

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380 6/26 (23%)
LRR 105..433 CDD:443914 87/362 (24%)
leucine-rich repeat 105..128 CDD:275380 4/22 (18%)
leucine-rich repeat 129..152 CDD:275380 8/22 (36%)
leucine-rich repeat 153..176 CDD:275380 8/22 (36%)
leucine-rich repeat 177..200 CDD:275380 10/22 (45%)
leucine-rich repeat 201..224 CDD:275380 6/22 (27%)
leucine-rich repeat 225..258 CDD:275380 6/33 (18%)
leucine-rich repeat 259..310 CDD:275380 15/78 (19%)
leucine-rich repeat 311..344 CDD:275380 8/38 (21%)
leucine-rich repeat 345..368 CDD:275380 5/22 (23%)
leucine-rich repeat 369..390 CDD:275380 5/20 (25%)
leucine-rich repeat 393..417 CDD:275380 6/23 (26%)
LOC1270053XP_308715.5 None

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