DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18249 and RXFP2

DIOPT Version :10

Sequence 1:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_570718.1 Gene:RXFP2 / 122042 HGNCID:17318 Length:754 Species:Homo sapiens


Alignment Length:324 Identity:80/324 - (24%)
Similarity:134/324 - (41%) Gaps:46/324 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly   104 NLTSLQMQGTSLGVLRDQIFNAVPRLEILQLSQNFIHTVHVAAFQGLSKLRLLGLQGNAIAEILS 168
            |:|.|.::...:..|.|::|....:|:.:.|..|.|..:...||.||..|::|.|..|.|..:..
Human   138 NVTLLSLKKNKIHSLPDKVFIKYTKLKKIFLQHNCIRHISRKAFFGLCNLQILYLNHNCITTLRP 202

  Fly   169 STLDPLMELVHLDLSRNELTTLPQNIFAKNKKLQTLLLNGNPLRILMPDVLGSLPNLRLLDL-GH 232
            .....|.:|..|.|..|.:|.:.|.:|.....|..|.:..|.|..|...:...:|.|..:|| |:
Human   203 GIFKDLHQLTWLILDDNPITRISQRLFTGLNSLFFLSMVNNYLEALPKQMCAQMPQLNWVDLEGN 267

  Fly   233 AAELEVMTLNLTNVQNLVLEGSSLSSLVI---NGGFI--KLQAGNNELNHLQVGNKSSVIEMDLH 292
            ..:.      |||  :..|...||:.|.:   ..||:  |..:....|..|.: :.:::.|:..|
Human   268 RIKY------LTN--STFLSCDSLTVLFLPRNQIGFVPEKTFSSLKNLGELDL-SSNTITELSPH 323

  Fly   293 GNLLNGNDTAALLRGMWNLQRLDLS--------KNRIEALPQHGSGLDAS-------GTQELLIL 342
                       |.:.:..||:|:||        ||:.|:|.|..| ||..       .|:....:
Human   324 -----------LFKDLKLLQKLNLSSNPLMYLHKNQFESLKQLQS-LDLERIEIPNINTRMFQPM 376

  Fly   343 PSLKFLNLANNQLVRLPPE----SPILSSRLSYLDLSHNLMLTLDVAILRSLSVLKGLYVEGNR 402
            .:|..:...|.:.....|.    .|:.....|:.||..|.:|.:.|.::..::....|:|.|.|
Human   377 KNLSHIYFKNFRYCSYAPHVRICMPLTDGISSFEDLLANNILRIFVWVIAFITCFGNLFVIGMR 440

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380
LRR 105..433 CDD:443914 79/323 (24%)
leucine-rich repeat 105..128 CDD:275380 5/22 (23%)
leucine-rich repeat 129..152 CDD:275380 8/22 (36%)
leucine-rich repeat 153..176 CDD:275380 6/22 (27%)
leucine-rich repeat 177..200 CDD:275380 7/22 (32%)
leucine-rich repeat 201..224 CDD:275380 5/22 (23%)
leucine-rich repeat 225..258 CDD:275380 10/33 (30%)
leucine-rich repeat 259..310 CDD:275380 9/55 (16%)
leucine-rich repeat 311..344 CDD:275380 14/47 (30%)
leucine-rich repeat 345..368 CDD:275380 4/26 (15%)
leucine-rich repeat 369..390 CDD:275380 6/20 (30%)
leucine-rich repeat 393..417 CDD:275380 4/10 (40%)
RXFP2NP_570718.1 LDLa 45..80 CDD:238060
LRR <128..370 CDD:443914 65/252 (26%)
LRR 1 138..159 6/20 (30%)
leucine-rich repeat 139..162 CDD:275380 5/22 (23%)
LRR 2 162..183 6/20 (30%)
leucine-rich repeat 163..186 CDD:275380 8/22 (36%)
LRR 3 186..207 5/20 (25%)
leucine-rich repeat 187..210 CDD:275380 6/22 (27%)
LRR 4 210..231 7/20 (35%)
leucine-rich repeat 211..234 CDD:275380 7/22 (32%)
LRR 5 234..255 5/20 (25%)
leucine-rich repeat 235..258 CDD:275380 5/22 (23%)
LRR 6 258..279 7/28 (25%)
leucine-rich repeat 259..282 CDD:275380 8/30 (27%)
LRR 7 282..303 6/20 (30%)
leucine-rich repeat 283..306 CDD:275380 5/22 (23%)
LRR 8 306..327 5/32 (16%)
leucine-rich repeat 307..330 CDD:275380 5/34 (15%)
LRR 9 330..351 7/20 (35%)
leucine-rich repeat 331..354 CDD:275380 9/22 (41%)
LRR 10 354..375 5/21 (24%)
leucine-rich repeat 355..374 CDD:275380 4/19 (21%)
7tmA_RXFP2_LGR8 416..702 CDD:320632 6/25 (24%)
TM helix 1 417..443 CDD:320632 6/24 (25%)
TM helix 2 450..475 CDD:320632
TM helix 3 495..525 CDD:320632
TM helix 4 536..558 CDD:320632
TM helix 5 586..615 CDD:320632
TM helix 6 631..661 CDD:320632
TM helix 7 670..695 CDD:320632
Blue background indicates that the domain is not in the aligned region.

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