DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18249 and LOC101882092

DIOPT Version :9

Sequence 1:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_005164829.1 Gene:LOC101882092 / 101882092 -ID:- Length:678 Species:Danio rerio


Alignment Length:412 Identity:109/412 - (26%)
Similarity:170/412 - (41%) Gaps:89/412 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    35 CPDSFCSLSDRPVAYSATPALQL--------RELHLRNCSRQSITWLVLQLTPGLRTLVIR-NCA 90
            || |.||...|.|..|....:::        |.:.|.|....||...:|.....:..||:| |..
Zfish   307 CP-SECSCYGRVVQCSDKHLVKIPYGIPYNSRYILLMNNKIDSIQLNLLSQYDSMEFLVLRNNRL 370

  Fly    91 TYHISKESLRPVENLTSLQMQGTSLGVLRDQIFNAVPRLEILQLSQNFIHTVHVAAFQGLSKLRL 155
            |....|::...::.|..|.::   ..:||....:....||.|:|..|.|..:..|||:....|::
Zfish   371 TDSAVKKAFEGIQRLKRLYVE---RNLLRSIPTDLPATLEELRLDWNQISAMSNAAFERCPSLQI 432

  Fly   156 LGLQGNAIAEILSSTLDPLMELVHLDLSRNELTTLPQNIFAKNKKLQTLLLNGNPLRILMPDVLG 220
            |.|..|.:..|....|.||..|..|.||.|:|.::|..:   ...|:.|.|.||.::.|..|:..
Zfish   433 LSLSNNTLLTIPPGVLLPLGSLRTLTLSYNQLASVPMQL---PLSLRELYLRGNRIQRLQGDMFW 494

  Fly   221 SLPNLRLLD----------LGHAAELEVMTLNLTNVQNLVLEGS-----------SLSSLVINGG 264
            ....|::||          ||.||     .||.|.:::|.|||:           ::.:|.:.|.
Zfish   495 GESELQILDLSLNRLTDKGLGKAA-----LLNATGLESLNLEGNLLKRVPRHLPHTIKTLNLEGN 554

  Fly   265 FIKLQAGNNELNHLQVGNKSSVIEMDLHGNL-LNGNDTAALLRGMWN----LQRLDLSKNRIEAL 324
            ||           |.: .|.:.:.|....:| |..|..|.:..|.:.    |.:||:|.|.:|.:
Zfish   555 FI-----------LSI-TKDAFVSMPQLEHLGLARNKIAKVALGAFRVLPLLHQLDMSYNALEQV 607

  Fly   325 PQHGSGLDASGTQELLILPSLKFLNLANNQLVRLP------------PESPILSSRLSY--LDLS 375
            |:          |..|.|.|..|:   :|.:..:|            |.|.::..:|.|  :||.
Zfish   608 PR----------QLPLWLHSATFM---HNNIRSIPRDAFCWGRDNVSPLSRLVKVQLEYNMIDLG 659

  Fly   376 HNLMLTLDVAILRSLSVLKGLY 397
            |  :.||....||...|:: ||
Zfish   660 H--LDTLAFRCLRGFQVVE-LY 678

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380 6/30 (20%)
LRR_8 104..163 CDD:290566 17/58 (29%)
leucine-rich repeat 105..128 CDD:275380 4/22 (18%)
LRR_RI 107..438 CDD:238064 88/331 (27%)
leucine-rich repeat 129..152 CDD:275380 9/22 (41%)
leucine-rich repeat 153..176 CDD:275380 8/22 (36%)
LRR_8 176..232 CDD:290566 18/65 (28%)
leucine-rich repeat 177..200 CDD:275380 7/22 (32%)
leucine-rich repeat 201..224 CDD:275380 7/22 (32%)
leucine-rich repeat 225..258 CDD:275380 14/53 (26%)
leucine-rich repeat 259..310 CDD:275380 12/51 (24%)
leucine-rich repeat 311..344 CDD:275380 10/32 (31%)
LRR_8 343..403 CDD:290566 18/69 (26%)
leucine-rich repeat 345..368 CDD:275380 5/34 (15%)
leucine-rich repeat 369..390 CDD:275380 9/22 (41%)
leucine-rich repeat 393..417 CDD:275380 2/5 (40%)
LOC101882092XP_005164829.1 LRRNT 307..335 CDD:214470 8/28 (29%)
leucine-rich repeat 316..334 CDD:275380 3/17 (18%)
leucine-rich repeat 337..359 CDD:275380 6/21 (29%)
LRR_RI 360..596 CDD:238064 68/258 (26%)
leucine-rich repeat 360..384 CDD:275380 6/23 (26%)
leucine-rich repeat 385..404 CDD:275380 4/21 (19%)
LRR_8 405..464 CDD:290566 22/58 (38%)
leucine-rich repeat 406..429 CDD:275380 9/22 (41%)
leucine-rich repeat 430..453 CDD:275380 8/22 (36%)
leucine-rich repeat 454..474 CDD:275380 7/22 (32%)
LRR_8 474..535 CDD:290566 21/65 (32%)
leucine-rich repeat 475..498 CDD:275380 7/22 (32%)
leucine-rich repeat 499..524 CDD:275380 9/29 (31%)
leucine-rich repeat 525..544 CDD:275380 4/18 (22%)
leucine-rich repeat 546..569 CDD:275380 7/34 (21%)
LRR_8 547..604 CDD:290566 17/68 (25%)
leucine-rich repeat 570..593 CDD:275380 5/22 (23%)
leucine-rich repeat 618..645 CDD:275380 4/29 (14%)
leucine-rich repeat 646..671 CDD:275380 8/26 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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