DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG18249 and si:dkey-182i3.11

DIOPT Version :9

Sequence 1:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_021322095.1 Gene:si:dkey-182i3.11 / 100334238 ZFINID:ZDB-GENE-121214-258 Length:710 Species:Danio rerio


Alignment Length:526 Identity:134/526 - (25%)
Similarity:222/526 - (42%) Gaps:115/526 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    20 LAVYDASGRFNLSASCPDSFCSLSDRPVAYSATPALQLRELHLRNCSRQSITWLVLQLTPGLRTL 84
            |.|.|.|.  |...|.|..|        .|.   .:.|:.|:|......|:::.||:....|..|
Zfish   153 LQVLDLSN--NAIKSLPQMF--------LYG---LINLQTLNLNINQILSLSYGVLEGPLALTDL 204

  Fly    85 VIR-------------NC---ATYHISKESLRPV------------------------------- 102
            .:|             ||   |..::||..|:.|                               
Zfish   205 QLRDNMIDMIEMNVFENCTYLAKLYLSKNKLKSVGNGSFKGATGLNHLDLGLNGLAGIPTIVLQE 269

  Fly   103 -ENLTSLQMQGTSLGVLRDQIFNAVPRLEILQLSQNFIHTVHVAAFQGLSKLRLLGLQGNAIAEI 166
             .|||||.:|...:..:.|.:|:.:..|:.|.||.|.:.::...:|:.||:|..|.|..|.:..:
Zfish   270 TSNLTSLYLQKNDITSIPDNVFSEILSLKHLDLSYNGLVSISNGSFRSLSQLVYLDLSFNQLQTL 334

  Fly   167 LSSTLDPLMELVHLDLSRNELTTLPQNIFAKNKKLQTLLLNGNPLRILMPDV---LGSLPNLRLL 228
            .....:.|.:|.:|:|..|:||:||.|:|.....|:.|.|:.|.:.::.||:   |.:|.:|: |
Zfish   335 TQHVFEDLGKLENLNLYHNKLTSLPNNMFKNLTMLKELQLDSNNISVIPPDLFHPLSALKDLQ-L 398

  Fly   229 DLGHAAELEVMTL-NLTNVQNLVLEGSSLSSLVINGGFIK-LQAGNNELNHLQVGNKSSVIEMD- 290
            |..|.::|...|. .|..::.|.:..:.|:. :.|..|.| |:..|.|.||:...:|.|...:. 
Zfish   399 DNNHISKLHSHTFKKLRQLKQLDISSNDLTK-IPNHLFHKNLKELNLENNHISFISKFSFKNLHR 462

  Fly   291 LHGNLLNGNDTAALLR----GMWNLQRLDLSKNRIEALP-QHGSGLDASGTQELLILPSLKFLNL 350
            |....|:.|:.:.|.|    .:..|:.|.|::|:||.:| ....||:           :|:.|:|
Zfish   463 LQSLKLSHNNLSKLYRELLTNLTRLRELLLNENQIETIPVGFFKGLE-----------NLRVLDL 516

  Fly   351 ANNQLVRLPPESPILSSRLSYLDLSHNLMLTLDVAILRSLSVLKGLYVEGNRLN---------TI 406
            :||::..:.|::....|.|..||||.|.:..|...|..||..|..|:::.|:|.         .:
Zfish   517 SNNKMHFILPDAFNDLSALKDLDLSFNFLHNLPEDIFASLRNLTKLHLQNNKLRYLPSRLFSALV 581

  Fly   407 NYQKLHEE-------HPDLSE--LGLHDNPWSSGLYRKMFLYFTDRGVHLQARPQNRVLNKSSRV 462
            ..::||.:       ||...|  :.||:....|...|.|     :.|..:.       |.|..|:
Zfish   582 GLEELHLDRNYIQRIHPTQFEGLVKLHELDMKSNQLRSM-----EDGTLMP-------LRKLKRI 634

  Fly   463 DIDWPP 468
            .:|..|
Zfish   635 HLDGNP 640

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380 6/22 (27%)
LRR_8 104..163 CDD:290566 20/58 (34%)
leucine-rich repeat 105..128 CDD:275380 7/22 (32%)
LRR_RI 107..438 CDD:238064 100/359 (28%)
leucine-rich repeat 129..152 CDD:275380 7/22 (32%)
leucine-rich repeat 153..176 CDD:275380 5/22 (23%)
LRR_8 176..232 CDD:290566 21/58 (36%)
leucine-rich repeat 177..200 CDD:275380 10/22 (45%)
leucine-rich repeat 201..224 CDD:275380 8/25 (32%)
leucine-rich repeat 225..258 CDD:275380 9/33 (27%)
leucine-rich repeat 259..310 CDD:275380 15/56 (27%)
leucine-rich repeat 311..344 CDD:275380 9/33 (27%)
LRR_8 343..403 CDD:290566 20/59 (34%)
leucine-rich repeat 345..368 CDD:275380 6/22 (27%)
leucine-rich repeat 369..390 CDD:275380 8/20 (40%)
leucine-rich repeat 393..417 CDD:275380 7/39 (18%)
si:dkey-182i3.11XP_021322095.1 PLN00113 97..>617 CDD:331614 126/489 (26%)
leucine-rich repeat 129..152 CDD:275380
leucine-rich repeat 153..176 CDD:275380 9/35 (26%)
leucine-rich repeat 177..200 CDD:275380 6/22 (27%)
leucine-rich repeat 201..224 CDD:275380 5/22 (23%)
leucine-rich repeat 225..248 CDD:275380 5/22 (23%)
leucine-rich repeat 249..272 CDD:275380 0/22 (0%)
leucine-rich repeat 273..296 CDD:275380 7/22 (32%)
leucine-rich repeat 297..320 CDD:275380 7/22 (32%)
leucine-rich repeat 321..344 CDD:275380 5/22 (23%)
leucine-rich repeat 345..368 CDD:275380 10/22 (45%)
leucine-rich repeat 369..392 CDD:275380 7/22 (32%)
leucine-rich repeat 393..438 CDD:275380 12/46 (26%)
leucine-rich repeat 417..436 CDD:275380 3/19 (16%)
leucine-rich repeat 439..462 CDD:275380 7/22 (32%)
leucine-rich repeat 463..486 CDD:275380 5/22 (23%)
leucine-rich repeat 487..510 CDD:275380 9/33 (27%)
leucine-rich repeat 511..534 CDD:275380 6/22 (27%)
leucine-rich repeat 535..558 CDD:275380 10/22 (45%)
leucine-rich repeat 559..582 CDD:275380 4/22 (18%)
leucine-rich repeat 583..606 CDD:275380 5/22 (23%)
leucine-rich repeat 607..628 CDD:275380 6/32 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
21.910

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