DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7800 and si:dkey-90m5.4

DIOPT Version :9

Sequence 1:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001038237.1 Gene:si:dkey-90m5.4 / 553466 ZFINID:ZDB-GENE-041014-250 Length:327 Species:Danio rerio


Alignment Length:272 Identity:80/272 - (29%)
Similarity:124/272 - (45%) Gaps:42/272 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 PYLTSLQLRRGNLLGLHDEHFSKWPNMKILMLGGNNITRLSNECFKGLAQLWLLSLPGNGIQGLP 151
            |..|||.::..||..|..||....|.::.|.|.||.::.|..:..|.|..|..:.|..|.::.||
Zfish    55 PSTTSLTIQFTNLTVLTSEHLRAVPLLEELHLPGNKLSSLPADILKDLKYLHTIDLTDNELRELP 119

  Fly   152 WDVFQNLPELLHLDLSGNRIETLHENIFTGVPKLEMLLLNGNPLTWIAPTSLKSLSNLRLLDMS- 215
            ..||::.| ||:|.|..|||..:|.:.|.....|..|.|:||.|.......|::|.:|::|.:| 
Zfish   120 EYVFRHAP-LLNLVLKDNRISNIHPDWFPNNSNLTWLDLSGNQLMKFPMAQLQNLRHLKVLHLSQ 183

  Fly   216 -NCGPLPDLSLPGAHT----LILDNSGVQRLDILGSVHKLQARKNHITEIKLPDKSSVIELDLHS 275
             ....|| :....|||    |.||.:.:|.||:     |..:...::|.|.| .|:.:..|.   
Zfish   184 NKIEELP-VGCLDAHTALERLYLDQNKIQTLDV-----KAFSGSTNLTHIFL-QKNRIDSLP--- 238

  Fly   276 NLLTATDIPKLLTGMWRLQRLDLSENIIGIYAAAGSDNTSELFILPNLMYMNLSANRLT--RLHF 338
                    |.:...:.||:.:|||:|.:             .|:.|.::.:|.|...||  ..|.
Zfish   239 --------PTVFQELKRLEYVDLSDNRL-------------QFLSPGILDINTSWVELTFNPWHC 282

  Fly   339 DSPIP--WERLT 348
            |:.|.  |.::|
Zfish   283 DAKIEYLWRKIT 294

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380
leucine-rich repeat 65..85 CDD:275380
LRR_8 87..147 CDD:290566 20/59 (34%)
leucine-rich repeat 89..112 CDD:275380 8/22 (36%)
leucine-rich repeat 113..136 CDD:275380 7/22 (32%)
LRR_RI <131..334 CDD:238064 58/208 (28%)
leucine-rich repeat 137..160 CDD:275380 7/22 (32%)
LRR_8 140..195 CDD:290566 21/54 (39%)
leucine-rich repeat 161..184 CDD:275380 9/22 (41%)
leucine-rich repeat 185..208 CDD:275380 8/22 (36%)
leucine-rich repeat 209..246 CDD:275380 14/42 (33%)
leucine-rich repeat 247..267 CDD:275380 5/19 (26%)
leucine-rich repeat 268..292 CDD:275380 2/23 (9%)
leucine-rich repeat 293..322 CDD:275380 6/28 (21%)
leucine-rich repeat 395..406 CDD:275378
si:dkey-90m5.4NP_001038237.1 LRR_8 55..115 CDD:404697 20/59 (34%)
leucine-rich repeat 57..80 CDD:275380 8/22 (36%)
leucine-rich repeat 81..104 CDD:275380 7/22 (32%)
PPP1R42 102..279 CDD:411060 59/208 (28%)
leucine-rich repeat 105..126 CDD:275380 7/20 (35%)
leucine-rich repeat 128..151 CDD:275380 9/22 (41%)
leucine-rich repeat 152..175 CDD:275380 8/22 (36%)
leucine-rich repeat 176..199 CDD:275380 7/23 (30%)
leucine-rich repeat 200..223 CDD:275380 7/27 (26%)
leucine-rich repeat 224..247 CDD:275380 6/34 (18%)
leucine-rich repeat 248..271 CDD:275380 8/35 (23%)
TPKR_C2 278..319 CDD:417692 5/17 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.100

Return to query results.
Submit another query.