DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7800 and kek6

DIOPT Version :9

Sequence 1:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001263151.1 Gene:kek6 / 43729 FlyBaseID:FBgn0039862 Length:843 Species:Drosophila melanogaster


Alignment Length:351 Identity:88/351 - (25%)
Similarity:144/351 - (41%) Gaps:66/351 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly   111 PN-----MKILMLGGNNITRLSNECFK--GLAQLWLLSLPGNGIQGLPWDVFQNLPELLHLDLSG 168
            ||     :::|:|..|:|..|:.|.|.  ||..|..:.|..:.:|.:..:.|:||..|:.:|||.
  Fly    64 PNTLSTELQVLVLNDNHIPYLNREEFSTLGLLNLQRIYLKKSEVQYIHKESFRNLKILVEIDLSD 128

  Fly   169 NRIETLHENIFTGVPKLEMLLLNGNPLTWIAPTSLKSLSNLRLLDMSNCGPLPDLSLPGAHTLI- 232
            |::|.|.::.|.|..:|.:|.||||||..:|......|.:||.|||.:|             || 
  Fly   129 NKLEMLDKDTFMGNDRLRILYLNGNPLKRLAAYQFPILPHLRTLDMHDC-------------LIS 180

  Fly   233 -LDNSGVQRLDILGSVHKLQARKNHITEIKLPDKSSVIELDLHSNLLTATDIPKLLTGMWRLQRL 296
             :|...:..|::|..::........::|......:::..|.|..|........:...|.:...||
  Fly   181 YIDPMSLANLNLLEFLNLKNNLLESLSEYVFQHMANLKTLSLEENPWQCNCKLRKFRGWYVNSRL 245

  Fly   297 DLSENIIGIYAAAGSDNT-----SELF-------ILPNLMYMNL---SANRLTRLHFDSPIP--- 343
            . |.:::.....|..|.|     .|||       |..|....|:   |....:.|.:..|:|   
  Fly   246 S-SVSLVCKGPPAQKDRTWDSVDDELFGCPPRVEIFNNEEVQNIDIGSNTTFSCLVYGDPLPEVA 309

  Fly   344 WERLTHLDASYNRIYAPAKVGIDE------AFNLQSLHLEGNYINNFELTPWKPHPSLKEVALYD 402
            ||....:..:.|.::....:..|:      .||:.||. .|.|                  |...
  Fly   310 WELNGKILDNDNVLFESESIASDKLWSNLTVFNVTSLD-AGTY------------------ACTG 355

  Fly   403 NKFQPKGYKNITKFFNEIGVNVLEKT 428
            :.......:||:.:.:||..:|||||
  Fly   356 SNSIGSMTQNISIYLSEIVQHVLEKT 381

Known Domains:


Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.

GeneSequenceDomainRegion External IDIdentity
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380
leucine-rich repeat 65..85 CDD:275380
LRR_8 87..147 CDD:290566 13/42 (31%)