DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7800 and CG18249

DIOPT Version :10

Sequence 1:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_001163549.1 Gene:CG18249 / 40964 FlyBaseID:FBgn0037553 Length:559 Species:Drosophila melanogaster


Alignment Length:561 Identity:202/561 - (36%)
Similarity:295/561 - (52%) Gaps:48/561 - (8%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIIIALLASVSALGRPDLEDYCNDSYCHLLGRSRTFSDKKATKLTEFHMDSCEKK-----VLKLM 62
            |.:...||...|.||.:|...|.||:|.|..|...:|...|.:|.|.|:.:|.::     ||:|.
  Fly    14 LTVSDALAVYDASGRFNLSASCPDSFCSLSDRPVAYSATPALQLRELHLRNCSRQSITWLVLQLT 78

  Fly    63 PNLRTLELENCDSPDFTMNDLNQLPYLTSLQLRRGNLLGLHDEHFSKWPNMKILMLGGNNITRLS 127
            |.||||.:.||.:...:...|..:..|||||::..:|..|.|:.|:..|.::||.|..|.|..:.
  Fly    79 PGLRTLVIRNCATYHISKESLRPVENLTSLQMQGTSLGVLRDQIFNAVPRLEILQLSQNFIHTVH 143

  Fly   128 NECFKGLAQLWLLSLPGNGIQGLPWDVFQNLPELLHLDLSGNRIETLHENIFTGVPKLEMLLLNG 192
            ...|:||::|.||.|.||.|..:.......|.||:|||||.|.:.||.:|||....||:.|||||
  Fly   144 VAAFQGLSKLRLLGLQGNAIAEILSSTLDPLMELVHLDLSRNELTTLPQNIFAKNKKLQTLLLNG 208

  Fly   193 NPLTWIAPTSLKSLSNLRLLDMSNCGPLP--DLSLPGAHTLILDNSGVQRLDILGSVHKLQARKN 255
            |||..:.|..|.||.||||||:.:...|.  .|:|.....|:|:.|.:..|.|.|...||||..|
  Fly   209 NPLRILMPDVLGSLPNLRLLDLGHAAELEVMTLNLTNVQNLVLEGSSLSSLVINGGFIKLQAGNN 273

  Fly   256 HITEIKLPDKSSVIELDLHSNLLTATDIPKLLTGMWRLQRLDLSENIIGIYAAAGS----DNTSE 316
            .:..:::.:||||||:|||.|||...|...||.|||.|||||||:|.|......||    ..|.|
  Fly   274 ELNHLQVGNKSSVIEMDLHGNLLNGNDTAALLRGMWNLQRLDLSKNRIEALPQHGSGLDASGTQE 338

  Fly   317 LFILPNLMYMNLSANRLTRLHFDSPIPWERLTHLDASYNRIYAPAKVGIDEAFN-LQSLHLEGNY 380
            |.|||:|.::||:.|:|.||..:|||...||::||.|:| :.....|.|..:.: |:.|::|||.
  Fly   339 LLILPSLKFLNLANNQLVRLPPESPILSSRLSYLDLSHN-LMLTLDVAILRSLSVLKGLYVEGNR 402

  Fly   381 IN--NFELTPWKPHPSLKEVALYDNKFQPKGYKNITKFFNEIGVNVLEKTQYSQSNNTTPTCKPC 443
            :|  |::.. .:.||.|.|:.|:||.:....|:.:..:|.:.||::..:.|....|.::..    
  Fly   403 LNTINYQKL-HEEHPDLSELGLHDNPWSSGLYRKMFLYFTDRGVHLQARPQNRVLNKSSRV---- 462

  Fly   444 IPDARDFPTSISADTNQTID----TKVNPLSNDTYQWNVWNVLMLVSLIV---SLFVNSFLIVK- 500
              |. |:|.:......|.:|    |.::|      .|.:.::|..|:|:|   .|.:|.:.|:: 
  Fly   463 --DI-DWPPNEGQAEAQKMDPPGVTGIHP------YWTLRDILAFVTLLVVMIILLMNLYHILEE 518

  Fly   501 ---LIRLR--------GRNQFTQSSSVPAIIEMFSNESDDE 530
               |.|.|        |:|..|..:|...:.|..|.:|..|
  Fly   519 EGCLRRFRHWRRSRTLGQNTSTTRNSGRRLDEQDSEQSSSE 559

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380 7/22 (32%)
leucine-rich repeat 65..85 CDD:275380 7/19 (37%)
LRR 68..482 CDD:443914 158/426 (37%)
leucine-rich repeat 89..112 CDD:275380 9/22 (41%)
leucine-rich repeat 113..136 CDD:275380 8/22 (36%)
leucine-rich repeat 137..160 CDD:275380 8/22 (36%)
leucine-rich repeat 161..184 CDD:275380 12/22 (55%)
leucine-rich repeat 185..208 CDD:275380 13/22 (59%)
leucine-rich repeat 209..246 CDD:275380 13/38 (34%)
leucine-rich repeat 247..267 CDD:275380 6/19 (32%)
leucine-rich repeat 268..292 CDD:275380 14/23 (61%)
leucine-rich repeat 293..322 CDD:275380 16/32 (50%)
leucine-rich repeat 395..406 CDD:275378 5/10 (50%)
CG18249NP_001163549.1 leucine-rich repeat 57..80 CDD:275380 7/22 (32%)
LRR 105..433 CDD:443914 140/329 (43%)
leucine-rich repeat 105..128 CDD:275380 9/22 (41%)
leucine-rich repeat 129..152 CDD:275380 8/22 (36%)
leucine-rich repeat 153..176 CDD:275380 8/22 (36%)
leucine-rich repeat 177..200 CDD:275380 12/22 (55%)
leucine-rich repeat 201..224 CDD:275380 13/22 (59%)
leucine-rich repeat 225..258 CDD:275380 11/32 (34%)
leucine-rich repeat 259..310 CDD:275380 25/50 (50%)
leucine-rich repeat 311..344 CDD:275380 16/32 (50%)
leucine-rich repeat 345..368 CDD:275380 10/22 (45%)
leucine-rich repeat 369..390 CDD:275380 7/21 (33%)
leucine-rich repeat 393..417 CDD:275380 8/24 (33%)

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