DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7800 and Lrrc32

DIOPT Version :10

Sequence 1:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster
Sequence 2:XP_006229808.1 Gene:Lrrc32 / 293135 RGDID:1309087 Length:690 Species:Rattus norvegicus


Alignment Length:576 Identity:133/576 - (23%)
Similarity:208/576 - (36%) Gaps:205/576 - (35%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 LIIIALLASVSALGRPDLEDYC----NDSYCHLLGRSRTFS----DKKATKLT------------ 47
            ||::|:|....|:.:...:..|    .::.||.|...:..|    |.:|..|:            
  Rat    33 LILLAMLTLGLAISQRRDQVPCRTVNKEALCHGLSLLQVPSVLSLDIQALYLSGNRLQSILVSPL 97

  Fly    48 EF-----HMDSCEKK-------VLKLMPNLRTLEL-ENCDSPDFTMND--LNQLPYLTSLQLRRG 97
            .|     |:|..:.:       |.:.:|.|..|.| .|..:....:|.  |.:||.:.||.|...
  Rat    98 SFYTALRHLDLSDNEISFLQPGVFQALPYLEHLNLAHNRLAAGMALNSGGLGRLPLVVSLDLSGN 162

  Fly    98 NLLG-LHDEHFSKWPNMKILMLGGNNITRLSNECFKGLAQLWLLSLPGNGIQGLPWDVFQNLPEL 161
            :|.| |.:....:.|.::.|.|..|::|||:...|.|:..:..|.|..|.:..:....|:.||:|
  Rat   163 SLHGSLVERLLGEAPRLRTLSLAENSLTRLARHTFWGMPAMEQLDLHSNVLMDIEDGAFEALPQL 227

  Fly   162 LH---------------------LDLSGNRIET-----------------LHEN----------- 177
            .|                     ||||.|.|||                 |.||           
  Rat   228 THLNLSRNSLTCISDFSLQQLQVLDLSCNSIETFQTAPESQAQFQLAWLDLRENKLLHFPDLAMF 292

  Fly   178 --------------IFTGVPK----------------------------LEMLL---LNGNPLTW 197
                          :.||:|:                            |..||   |:.|.:..
  Rat   293 PRLIYLNVSNNLIQLPTGLPQDSEDLHAPSEGWSASLLSNPSRNASIHPLSQLLNLDLSYNEIEL 357

  Fly   198 IAPTSLKSLSNLRLLDMS-NC---------GPLPDLSLPGAHTLILDNSGVQRLD----ILGSVH 248
            :....|:.|::||.|::| ||         |.||.|.|     |.|.::.::.|:    :|||:.
  Rat   358 VPAGFLEHLTSLRFLNLSRNCLRSFEARRAGSLPCLVL-----LDLSHNVLEALELGTKVLGSLK 417

  Fly   249 KLQARKNHITEIKLPDKSSVIELDLHSNLLTATDIPKLLTGMWRLQRLDLSENII---GIYAAAG 310
            .|..:.|.:.|  ||                    |....|:..||||:|..|.:   |..|..|
  Rat   418 TLLLQDNTLRE--LP--------------------PYTFAGLASLQRLNLQGNQVSPCGGQAEPG 460

  Fly   311 SDNTSELFILPNLMYMNLSANRLTRLHFDSPI--PWERLTHLDASYN---RIYAPAKVGIDEAFN 370
            .....:...:|.|.::|::.|.:..|...|.:  |   ||.||.|.|   .:...|.||::.  :
  Rat   461 PPGCVDFSGIPTLHFLNMAGNSMETLRAGSFLHTP---LTELDLSANPGLDVATGALVGLEA--S 520

  Fly   371 LQSLHLEGN----------------YINNFE-----LTPWKPHPSLKEVALYDNKF 405
            |:.|.|:||                .:|..|     |..|....||:.:.|.:|.|
  Rat   521 LEVLELQGNGLVVLRVDLPCFRRLKRLNLAENRLSHLPAWTRAVSLEVLDLRNNSF 576

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380 5/41 (12%)
leucine-rich repeat 65..85 CDD:275380 6/22 (27%)
LRR 68..482 CDD:443914 114/479 (24%)
leucine-rich repeat 89..112 CDD:275380 6/23 (26%)
leucine-rich repeat 113..136 CDD:275380 8/22 (36%)
leucine-rich repeat 137..160 CDD:275380 5/22 (23%)
leucine-rich repeat 161..184 CDD:275380 15/85 (18%)
leucine-rich repeat 185..208 CDD:275380 7/25 (28%)
leucine-rich repeat 209..246 CDD:275380 15/50 (30%)
leucine-rich repeat 247..267 CDD:275380 5/19 (26%)
leucine-rich repeat 268..292 CDD:275380 2/23 (9%)
leucine-rich repeat 293..322 CDD:275380 9/31 (29%)
leucine-rich repeat 395..406 CDD:275378 4/11 (36%)
Lrrc32XP_006229808.1 PPP1R42 82..305 CDD:455733 48/222 (22%)
leucine-rich repeat 82..102 CDD:275380 2/19 (11%)
leucine-rich repeat 103..126 CDD:275380 3/22 (14%)
leucine-rich repeat 127..153 CDD:275380 7/25 (28%)
LRR 153..575 CDD:443914 105/453 (23%)
leucine-rich repeat 154..178 CDD:275380 6/23 (26%)
leucine-rich repeat 179..202 CDD:275380 8/22 (36%)
leucine-rich repeat 203..226 CDD:275380 5/22 (23%)
leucine-rich repeat 227..247 CDD:275380 2/19 (11%)
leucine-rich repeat 248..272 CDD:275380 8/23 (35%)
leucine-rich repeat 273..294 CDD:275380 3/20 (15%)
leucine-rich repeat 345..368 CDD:275380 6/22 (27%)
leucine-rich repeat 393..415 CDD:275380 6/26 (23%)
leucine-rich repeat 416..439 CDD:275380 7/44 (16%)
leucine-rich repeat 440..472 CDD:275380 9/31 (29%)
leucine-rich repeat 473..494 CDD:275380 5/20 (25%)
leucine-rich repeat 496..520 CDD:275380 9/25 (36%)
leucine-rich repeat 521..543 CDD:275380 5/21 (24%)
leucine-rich repeat 544..565 CDD:275380 4/20 (20%)
leucine-rich repeat 566..587 CDD:275380 4/11 (36%)

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