DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7800 and pan-1

DIOPT Version :9

Sequence 1:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_497925.1 Gene:pan-1 / 175596 WormBaseID:WBGene00003915 Length:594 Species:Caenorhabditis elegans


Alignment Length:553 Identity:118/553 - (21%)
Similarity:209/553 - (37%) Gaps:143/553 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    26 DSYCHLLGRSRTFSDKKATKLTEFHMDSCEKKVLKLMPNLRTLELENCDSPDFTMNDLNQLPYLT 90
            :|:..|.|.:...|      |.|..:...||.:...:.:|:||:|......:..:....:|..:.
 Worm   120 NSFQSLGGSAELLS------LRENRIKKLEKGLFTGLKSLKTLDLAMNKIQEIDVGAFEELKKVE 178

  Fly    91 SLQLRRGNLLGLHDEHFSKWPNMKILMLGGNNITRLSNECFKGLAQLWLLSLPGNGIQGLPWDVF 155
            .|.|...::..|....|....|:|.|.|...|:..:....|:||..|..|.|..|.::.:.|.:|
 Worm   179 ELLLNENDIRVLKTGTFDGMKNLKKLTLQNCNLEIIQKGAFRGLNSLEQLILSNNNLENIDWTIF 243

  Fly   156 QNLPELLHLDLSGNRIETLHENIFTGVPKLEMLLLNGNPLTWIAPTSLKSLSNLRLLDMSNCGPL 220
            ..|..|..|||..|:|..:....|   ||||.|:||.|        ::.|:.:::|.|       
 Worm   244 SALKNLRVLDLGSNKISNVEMKSF---PKLEKLVLNNN--------TIDSMKSIKLKD------- 290

  Fly   221 PDLSLPGAHTLILDNSGVQRLDILGSVHKLQARKNHITEIKLPDKSSVIELDLHSNLLTATDIPK 285
                ||.....:.|.:.::                           |:.::|:..  ||.:|   
 Worm   291 ----LPSLVVALFDRNKIE---------------------------SIGDMDMFG--LTRSD--- 319

  Fly   286 LLTGMWRLQRLDLSENIIGIYAAAGSDNTSELFILPNLMYMNLSANRLTRLHFDSP----IPW-- 344
                  |::.|.|:.|.:...:.....:|      |||:.:.|..|::..|...||    .|:  
 Worm   320 ------RIETLSLARNNLSQISPKAFQHT------PNLITLLLQYNQIEELSSHSPSQVRTPFLA 372

  Fly   345 --ERLTHLDASYNRIYAPAKVGIDE-AFNLQSLHLEGNYINNFELTPWKPHPSLKEVALYDNK-- 404
              ::|..|..|.|.:   :.:..|| ..:|.||.|:.|.|:..|....: ...:|.:.|:.||  
 Worm   373 SLKKLVTLQLSSNNL---SVIRSDELPKSLSSLALDHNVISKIEARALE-GMEIKRLYLHSNKLN 433

  Fly   405 ---------FQPKGYKNITKFFNEIGVNV---------------LEKTQYSQSNNTTPTCKPCIP 445
                     |.||..:.:     ::.:|.               ||.::.:........|. .||
 Worm   434 YLYQGTFDSFSPKSVEAV-----DVSLNPWVCVCNDPKEWLPRWLEASEEADVAEGALGCL-AIP 492

  Fly   446 DARDFPTSISADTNQTIDTKVNPLSNDTYQWNVW-----NVLMLVSLIVSLFVNSFLIVKLIR-- 503
            :.           .|...:.|.|...:.|: :.|     .:|.:|::::.:.: :.|..|..|  
 Worm   493 NC-----------GQKEGSTVMPEEEEVYR-SGWITVAATILTIVTIVIMVII-AMLYFKDARYQ 544

  Fly   504 --LRGRNQFTQSSSVPAIIEMFS-NESDDEIIL 533
              ||||.   ..|.:..:||... |.:.|.|::
 Worm   545 FPLRGRR---SDSDLHKLIENDPLNIASDSILV 574

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380 4/17 (24%)
leucine-rich repeat 65..85 CDD:275380 4/19 (21%)
LRR_8 87..147 CDD:290566 16/59 (27%)
leucine-rich repeat 89..112 CDD:275380 4/22 (18%)
leucine-rich repeat 113..136 CDD:275380 7/22 (32%)
LRR_RI <131..334 CDD:238064 46/202 (23%)
leucine-rich repeat 137..160 CDD:275380 7/22 (32%)
LRR_8 140..195 CDD:290566 21/54 (39%)
leucine-rich repeat 161..184 CDD:275380 7/22 (32%)
leucine-rich repeat 185..208 CDD:275380 7/22 (32%)
leucine-rich repeat 209..246 CDD:275380 5/36 (14%)
leucine-rich repeat 247..267 CDD:275380 0/19 (0%)
leucine-rich repeat 268..292 CDD:275380 4/23 (17%)
leucine-rich repeat 293..322 CDD:275380 4/28 (14%)
leucine-rich repeat 395..406 CDD:275378 4/21 (19%)
pan-1NP_497925.1 leucine-rich repeat 130..152 CDD:275380 5/27 (19%)
LRR_8 132..187 CDD:290566 12/60 (20%)
leucine-rich repeat 153..176 CDD:275380 5/22 (23%)
leucine-rich repeat 177..200 CDD:275380 4/22 (18%)
LRR_8 199..259 CDD:290566 20/59 (34%)
leucine-rich repeat 201..224 CDD:275380 7/22 (32%)
LRR_RI 224..434 CDD:238064 64/279 (23%)
leucine-rich repeat 225..248 CDD:275380 7/22 (32%)
leucine-rich repeat 249..269 CDD:275380 7/22 (32%)
LRR_8 268..355 CDD:290566 29/149 (19%)
leucine-rich repeat 270..293 CDD:275380 10/41 (24%)
leucine-rich repeat 294..320 CDD:275380 6/63 (10%)
LRR_8 320..387 CDD:290566 18/72 (25%)
leucine-rich repeat 321..344 CDD:275380 4/28 (14%)
LRR_8 375..432 CDD:290566 16/60 (27%)
leucine-rich repeat 377..398 CDD:275380 6/23 (26%)
leucine-rich repeat 399..420 CDD:275380 7/21 (33%)
leucine-rich repeat 423..442 CDD:275380 4/18 (22%)
LRR_RI 80..326 CDD:238064 60/271 (22%)
leucine-rich repeat 81..104 CDD:275380
leucine-rich repeat 105..128 CDD:275380 2/7 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.100

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