DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG7800 and lron-11

DIOPT Version :10

Sequence 1:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_491035.1 Gene:lron-11 / 171837 WormBaseID:WBGene00022129 Length:542 Species:Caenorhabditis elegans


Alignment Length:361 Identity:113/361 - (31%)
Similarity:171/361 - (47%) Gaps:49/361 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly    31 LLGRSRTFSDKKATKLTEFHMDSCEKKVLKLMPNLRTLELENCDSPDFTMNDLNQLPYLTSLQLR 95
            ||....|..|....:::....|.     |.|.|||..|.|.|......:.:..:.||.|..|.|.
 Worm    43 LLDPRTTVLDLSNNRISRLSADE-----LSLYPNLEQLILHNNSITHLSADVFSTLPSLRVLDLS 102

  Fly    96 RGNLLGLHDEHFSKWPNMKILMLGGNNITRLSNECFKGLAQLWLLSLPGNGIQGLPWDVFQNLPE 160
            ..:||.|.:|.|||..|:|.|::..|:: :|..|||.||:||..||:..|.:..||..|.:.|..
 Worm   103 SNSLLSLPNEVFSKLKNLKTLIISSNDV-QLGPECFAGLSQLQTLSIADNRLSFLPPSVLKPLSG 166

  Fly   161 LLHLDLSGNRIETLHENIFTGVPKLEMLLLNGNPLTWIAPTSLKSLSNLRLLDMSN--CGPLPDL 223
            |.:||||.|::.::..::...:..||.|.|..|.|:.:......|...|:.||:|.  .|.:.:.
 Worm   167 LRNLDLSANKLLSMPASVMNNLGGLETLKLKQNLLSSLETGMFLSQKELKHLDVSENLIGDIEEG 231

  Fly   224 SLPG---AHTLILDNSGVQRLDILGSVHKLQARKNHITEIKLPDKSSVIELDLHSNLLTATDIPK 285
            :|.|   ..||.|.|:.:.||.  |:...|.|.|.               |||.|||..:.:...
 Worm   232 ALYGLEKLETLNLTNNQLVRLP--GNTWSLPALKT---------------LDLSSNLFVSLETAS 279

  Fly   286 LLTGMWRLQRLDL--SENIIGIYAAAGSDNTSELFI-LPNLMYMNLSANRLTRLHFD--SPIPWE 345
             ..|:..||.|::  |.|:..|..|.        |: |.:|.::::|::.||.:|..  :|||  
 Worm   280 -FDGLPALQYLNISHSRNLKTIQMAT--------FVQLSSLHWLSISSSALTHIHPSAFNPIP-- 333

  Fly   346 RLTHLDASYN--RIYAPAKVGIDEAFNLQSLHLEGN 379
            .|:|||.|.|  |..||   |:.:..|:::|||..|
 Worm   334 PLSHLDLSNNELRYVAP---GMLQWPNIRNLHLANN 366

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380 3/17 (18%)
leucine-rich repeat 65..85 CDD:275380 4/19 (21%)
LRR 68..482 CDD:443914 103/324 (32%)
leucine-rich repeat 89..112 CDD:275380 10/22 (45%)
leucine-rich repeat 113..136 CDD:275380 9/22 (41%)
leucine-rich repeat 137..160 CDD:275380 8/22 (36%)
leucine-rich repeat 161..184 CDD:275380 6/22 (27%)
leucine-rich repeat 185..208 CDD:275380 7/22 (32%)
leucine-rich repeat 209..246 CDD:275380 13/41 (32%)
leucine-rich repeat 247..267 CDD:275380 3/19 (16%)
leucine-rich repeat 268..292 CDD:275380 7/23 (30%)
leucine-rich repeat 293..322 CDD:275380 9/31 (29%)
leucine-rich repeat 395..406 CDD:275378
lron-11NP_491035.1 LRR 33..368 CDD:443914 113/361 (31%)
leucine-rich repeat 48..71 CDD:275380 5/27 (19%)
leucine-rich repeat 72..95 CDD:275380 5/22 (23%)
leucine-rich repeat 96..119 CDD:275380 10/22 (45%)
leucine-rich repeat 120..142 CDD:275380 9/22 (41%)
leucine-rich repeat 143..166 CDD:275380 8/22 (36%)
leucine-rich repeat 167..190 CDD:275380 6/22 (27%)
leucine-rich repeat 191..214 CDD:275380 7/22 (32%)
leucine-rich repeat 215..238 CDD:275380 7/22 (32%)
leucine-rich repeat 239..261 CDD:275380 8/23 (35%)
leucine-rich repeat 262..283 CDD:275380 7/36 (19%)
leucine-rich repeat 286..310 CDD:275380 9/31 (29%)
leucine-rich repeat 311..334 CDD:275380 8/24 (33%)
leucine-rich repeat 335..357 CDD:275380 10/24 (42%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.