DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7800 and LRG1

DIOPT Version :9

Sequence 1:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster
Sequence 2:NP_443204.1 Gene:LRG1 / 116844 HGNCID:29480 Length:347 Species:Homo sapiens


Alignment Length:198 Identity:59/198 - (29%)
Similarity:79/198 - (39%) Gaps:43/198 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    43 ATKLTEFHMDSCEKKVLKLMPNLRTLELENCDSPDFTMNDLNQLPYLTSLQLRRGNLLGLHDEHF 107
            |:||.|.|:.|         ..|.:|      ||:|    |..:|.|..|.|.|..|.||....|
Human    91 ASKLQELHLSS---------NGLESL------SPEF----LRPVPQLRVLDLTRNALTGLPPGLF 136

  Fly   108 SKWPNMKILMLGGNNITRLSNECFKGLAQLWLLSLPGNGIQGLPWDVFQNLPELLHLDLSGNRIE 172
            .....:..|:|..|.:..|......||..|..|.|.||.::.||..:..|...|..|||..|::|
Human   137 QASATLDTLVLKENQLEVLEVSWLHGLKALGHLDLSGNRLRKLPPGLLANFTLLRTLDLGENQLE 201

  Fly   173 TLHENIFTG------------------------VPKLEMLLLNGNPLTWIAPTSLKSLSNLRLLD 213
            ||..::..|                        .|.|..|.||||.|..:|..:.:.|..|.:||
Human   202 TLPPDLLRGPLQLERLHLEGNKLQVLGKDLLLPQPDLRYLFLNGNKLARVAAGAFQGLRQLDMLD 266

  Fly   214 MSN 216
            :||
Human   267 LSN 269

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380 4/17 (24%)
leucine-rich repeat 65..85 CDD:275380 6/19 (32%)
LRR_8 87..147 CDD:290566 20/59 (34%)
leucine-rich repeat 89..112 CDD:275380 8/22 (36%)
leucine-rich repeat 113..136 CDD:275380 6/22 (27%)
LRR_RI <131..334 CDD:238064 34/110 (31%)
leucine-rich repeat 137..160 CDD:275380 8/22 (36%)
LRR_8 140..195 CDD:290566 23/78 (29%)
leucine-rich repeat 161..184 CDD:275380 9/46 (20%)
leucine-rich repeat 185..208 CDD:275380 9/22 (41%)
leucine-rich repeat 209..246 CDD:275380 5/8 (63%)
leucine-rich repeat 247..267 CDD:275380
leucine-rich repeat 268..292 CDD:275380
leucine-rich repeat 293..322 CDD:275380
leucine-rich repeat 395..406 CDD:275378
LRG1NP_443204.1 LRR_8 79..128 CDD:290566 17/55 (31%)
LRR_RI <82..248 CDD:238064 51/175 (29%)
LRR 1 93..114 11/39 (28%)
leucine-rich repeat 94..117 CDD:275380 10/41 (24%)
LRR_8 116..176 CDD:290566 20/59 (34%)
LRR 2 117..138 8/20 (40%)
leucine-rich repeat 118..141 CDD:275380 8/22 (36%)
LRR 3 141..162 4/20 (20%)
leucine-rich repeat 142..165 CDD:275380 6/22 (27%)
LRR 4 165..186 7/20 (35%)
leucine-rich repeat 166..189 CDD:275380 8/22 (36%)
LRR_8 169..224 CDD:290566 16/54 (30%)
LRR 5 189..210 8/20 (40%)
leucine-rich repeat 190..213 CDD:275380 9/22 (41%)
LRR_8 213..272 CDD:290566 15/57 (26%)
LRR 6 213..234 0/20 (0%)
leucine-rich repeat 214..237 CDD:275380 0/22 (0%)
LRR 7 237..258 8/20 (40%)
leucine-rich repeat 238..261 CDD:275380 9/22 (41%)
LRR 8 261..282 5/9 (56%)
leucine-rich repeat 262..285 CDD:275380 5/8 (63%)
LRRCT 299..346 CDD:214507
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR45617
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
11.100

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