DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG7800 and slitrk5b

DIOPT Version :9

Sequence 1:NP_649770.1 Gene:CG7800 / 40963 FlyBaseID:FBgn0037552 Length:533 Species:Drosophila melanogaster
Sequence 2:XP_002667367.2 Gene:slitrk5b / 100331252 ZFINID:ZDB-GENE-110408-55 Length:856 Species:Danio rerio


Alignment Length:678 Identity:130/678 - (19%)
Similarity:226/678 - (33%) Gaps:276/678 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    73 CDSPD--FTMN----DLNQLPYLTSLQ------LRRGNLL---GLHDEHFSKWPNMKILMLGGNN 122
            |:..|  ||.:    .:|.|..:|.|.      |..||||   .|:|  |..:..:.||.||.|:
Zfish    49 CEERDGIFTASCENRGINSLSEVTPLHFTAYHLLLTGNLLKKVSLND--FLHYEGLTILHLGNND 111

  Fly   123 ITRLSNECFKGLAQLWLLSLPGNGIQGLPWDVFQNLPELLHLDLSGNRIETLHENIFTGVPKLEM 187
            |..:....|             ||:|||.           .|.|:.|:||.|.::.|.|:..||.
Zfish   112 ICEIEAGAF-------------NGLQGLK-----------RLHLNNNKIEALKDDTFLGLESLEY 152

  Fly   188 LLLNGNPLTWIAPTSLKSLSNLRLLDMSN------------CGPLPDLSLPGAHTLILDNSGVQR 240
            |.::.|.::.|.|.:|.:|.:|.:|.:::            ..||..|.|.|....:|..||:  
Zfish   153 LQIDYNYISHIEPNALSALRHLEVLILNDNLLSALPHNIFQYVPLTHLDLRGNQLKVLPYSGL-- 215

  Fly   241 LDILGSVHKLQARKN-----------------------------------------HITEIKLPD 264
            |:.|..:.:||..:|                                         .|::.:|..
Zfish   216 LEHLSRIVELQLEENAWNCSCELIALKTWLESISYTALVGDVVCETPFRLHGRDLDEISKQELCP 280

  Fly   265 KSSVIELDLH----------------------SNLLTAT-------------------------- 281
            :.::.|.::|                      |.:|.:|                          
Zfish   281 RRAIAEYEMHAEMAHSSETVSKTTPATAGFASSTILRSTKSSRLSGKLRVKPTSRSSSSKPQNYG 345

  Fly   282 -------------DIPKLLTGMWRLQRLDLSENIIGIYAAAGSD------NTSELFILPN----- 322
                         |.|...|...::..|.|:.|.......:.||      |..::::..|     
Zfish   346 PMLAYQTKSPVPLDCPNTCTCNLQISDLGLNVNCQERKIESISDLDPKPYNPKKMYLTGNYISSV 410

  Fly   323 ----------LMYMNLSANR--------------LTRLHFDSPIPWERLTHLDASY--------- 354
                      |..::|..||              |.||:.:..: .||||. |..|         
Zfish   411 CSSDFSGATGLDLLHLGNNRIAVVHDKTFGQLIHLRRLYLNGNL-IERLTE-DMFYGLQSLQFLY 473

  Fly   355 --------------------------NRIYAPAKVGIDEAFNLQSLHLEGNYINNF-------EL 386
                                      |.:.....:||.:..||..|:|..|:....       ||
Zfish   474 LEYNVIREIAVGTFQQLPNLQLLFLNNNLLKTLHLGIFDGLNLARLNLRSNHFRTLPVIGVLDEL 538

  Fly   387 TPWKPHPSLKEVALYDNKFQPK-GYKNITKFFNEIG----VNVL----------EKTQYSQSNNT 436
            .      ||.::.|::|.:... ...::..:..::.    ||.:          |..:|.:|::.
Zfish   539 A------SLIQIDLFENPWDCSCSILDMKNWLEQLSAGTVVNTVICESPPRLSGEDMRYIRSSHI 597

  Fly   437 TP-------TCKPCIPDARDFP-TSISADTNQTIDTK--VNPLSNDTYQWNVWNVLMLVSLIVSL 491
            .|       :..|  |....|| ::|:.:|....||:  ..|||       |..:.:|:..|:|:
Zfish   598 CPESSIAQSSAVP--PSEESFPGSTITLETALDFDTQYPAVPLS-------VLILALLLLFILSV 653

  Fly   492 FVNSFLIVKLIRLRGRNQFTQSSSVPAI 519
            |:.:.|...:::.|.:::.:.|.:..||
Zfish   654 FIAAGLFAVIMKRRKKSERSASVTASAI 681

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG7800NP_649770.1 leucine-rich repeat 46..64 CDD:275380
leucine-rich repeat 65..85 CDD:275380 4/17 (24%)
LRR_8 87..147 CDD:290566 18/68 (26%)
leucine-rich repeat 89..112 CDD:275380 10/31 (32%)
leucine-rich repeat 113..136 CDD:275380 7/22 (32%)
LRR_RI <131..334 CDD:238064 58/351 (17%)
leucine-rich repeat 137..160 CDD:275380 5/22 (23%)
LRR_8 140..195 CDD:290566 17/54 (31%)
leucine-rich repeat 161..184 CDD:275380 8/22 (36%)
leucine-rich repeat 185..208 CDD:275380 8/22 (36%)
leucine-rich repeat 209..246 CDD:275380 12/48 (25%)
leucine-rich repeat 247..267 CDD:275380 5/60 (8%)
leucine-rich repeat 268..292 CDD:275380 8/84 (10%)
leucine-rich repeat 293..322 CDD:275380 6/34 (18%)
leucine-rich repeat 395..406 CDD:275378 3/10 (30%)
slitrk5bXP_002667367.2 LRR_8 79..136 CDD:290566 23/82 (28%)
leucine-rich repeat 80..101 CDD:275380 8/22 (36%)
LRR_RI <101..283 CDD:238064 45/207 (22%)
leucine-rich repeat 102..125 CDD:275380 9/35 (26%)
LRR_8 125..184 CDD:290566 20/69 (29%)
leucine-rich repeat 126..149 CDD:275380 9/33 (27%)
leucine-rich repeat 150..173 CDD:275380 8/22 (36%)
LRR_8 172..230 CDD:290566 14/59 (24%)
leucine-rich repeat 174..189 CDD:275380 2/14 (14%)
leucine-rich repeat 197..221 CDD:275380 9/25 (36%)
leucine-rich repeat 222..367 CDD:275380 13/144 (9%)
LRRCT 230..>268 CDD:214507 1/37 (3%)
leucine-rich repeat 368..420 CDD:275380 7/51 (14%)
leucine-rich repeat 376..397 CDD:275380 3/20 (15%)
LRR_8 419..479 CDD:290566 13/61 (21%)
leucine-rich repeat 421..444 CDD:275380 4/22 (18%)
LRR_4 444..482 CDD:289563 9/39 (23%)
leucine-rich repeat 445..468 CDD:275380 9/24 (38%)
leucine-rich repeat 469..488 CDD:275380 0/18 (0%)
leucine-rich repeat 493..515 CDD:275380 3/21 (14%)
leucine-rich repeat 516..540 CDD:275380 6/29 (21%)
LRRCT 549..599 CDD:214507 6/49 (12%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
11.000

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