DRSC/TRiP Functional Genomics Resources

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Protein Alignment grn and GAT2

DIOPT Version :10

Sequence 1:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_013856.1 Gene:GAT2 / 855167 SGDID:S000004744 Length:560 Species:Saccharomyces cerevisiae


Alignment Length:528 Identity:100/528 - (18%)
Similarity:184/528 - (34%) Gaps:143/528 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    39 NG----LGSAGSSLAHSHHSLSSGASSAGSSVGVGSALGGGGGSGLDTSDMSAFYALESNGHHRR 99
            ||    :.||.::.|:.:|..::..::..|:..:.:       :.:::...:....:.:|.|:|.
Yeast    55 NGPNAHINSANNNYAYYYHHPNNNDNNNHSNNTIKN-------NNINSVLPAVNIQISNNSHYRN 112

  Fly   100 YY--PSYHQH-TSRMPSTHASPQV-------CRPHFHTPLSPWLTSEHKSFAPASAWSMGQFACP 154
            .:  ||..|. .|.:|..|..|.:       ..|..|.|::   |..|....|.           
Yeast   113 THQIPSAPQRLVSIIPDPHMPPNISHFQLNNIHPQMHAPVA---TDIHFQQVPV----------- 163

  Fly   155 QEPQVEHKLGQMGQSHQTTAAGQHSFPFPPTPPKDSTPDSV-----QTGPSEYQAVMNAFMHQQA 214
                           :..|..|..:.......|.:|..:.|     :....|...|::...|.: 
Yeast   164 ---------------YNKTNNGIGTDNINNDKPVNSNQNEVLDNIDERSCHEINRVVSFSKHFE- 212

  Fly   215 TGSTSLTDASCALDIKPSIQNGSASGSSGSGTTHTSTPKQREGTAS----------TT--NSSSN 267
              :..||..:..|:|: |..:..|...|.|.:||.     |:..|:          ||  |..::
Yeast   213 --NNELTTTANDLNIQ-STMDELAKLKSLSNSTHF-----RQSIATQNFHSLQNHITTIENRLAS 269

  Fly   268 SSSSQQQQQQQQQQQQQQQQSSSNTTASSNTSASSSAAAASLSAAVAASAATSSNGLFDGTAQAY 332
            ..:.:||:|||.:||:.:::|||        ..|:.....||.....:.:.......:|....| 
Yeast   270 LLTDRQQEQQQLKQQESEKESSS--------PFSNKIKLPSLQELTDSISTQHLPTFYDNKRHA- 325

  Fly   333 SSGGSGGGGGGGSGSGGYDTSSYASYHHAAAHHQAAAVAAANMFQSSSVAAAAVRHSMAAAQAHH 397
                             .||...:|..|...:|:.|.::.::...|.:..:|.::......|...
Yeast   326 -----------------SDTDLKSSTLHGPLYHRHAFLSTSSSSPSPTAGSAPLQKLQVPRQDDP 373

  Fly   398 HHHHHHSGHHHSGS-------------SSGLHGLGGSVGGTAGMGSMSGNSGGAG---------S 440
            :....:.......|             .:.|..|     .|:.:.:...|:.|..         :
Yeast   374 NDKKMNISSSPFNSITYIPNTTLSPMVQTQLKNL-----TTSNLNTKKKNNRGRPRAIQRQPTLT 433

  Fly   441 LSGHSGAGSNAGSNCLDVKPVRTKPRTSAEGRE---------CVNCGATSTPLWRRDGTG-HYLC 495
            .|.|....||.|:..:..    |.|..:::.:.         |.:||.|.||.||:...| ..||
Yeast   434 TSSHFINNSNPGAAAVST----TTPAANSDEKNPNAKKIIEFCFHCGETETPEWRKGPYGTRTLC 494

  Fly   496 NACGLYYK 503
            |||||:|:
Yeast   495 NACGLFYR 502

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grnNP_001262366.1 ZnF_GATA 473..517 CDD:238123 17/41 (41%)
ZnF_GATA 533..583 CDD:238123
GAT2NP_013856.1 GAT1 25..551 CDD:227928 100/528 (19%)
Blue background indicates that the domain is not in the aligned region.

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