Sequence 1: | NP_001262366.1 | Gene: | grn / 40962 | FlyBaseID: | FBgn0001138 | Length: | 712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_579827.1 | Gene: | Gata3 / 85471 | RGDID: | 621250 | Length: | 444 | Species: | Rattus norvegicus |
Alignment Length: | 623 | Identity: | 205/623 - (32%) |
---|---|---|---|
Similarity: | 260/623 - (41%) | Gaps: | 246/623 - (39%) |
- Green bases have known domain annotations that are detailed below.
Fly 48 LAHSHHSLSSGASSAGSSVGVGSALGGGGGSGLD------TSDMSAFYALESNGHHRRYYPSYHQ 106
Fly 107 HT-----SRMPSTHASPQVCRPHFHTPLSPW------LTSEHKSFAPASAWSMGQFACPQEPQVE 160
Fly 161 HKLGQMG-------QSHQTTAAGQ---HSFPFPPTPPKDSTPDSVQTGPSEYQAVMNAFMHQQAT 215
Fly 216 GSTSLTDASCALDIKPSIQNGSASGSSGSGTTHTSTPKQREGTASTTNSSSNSSSSQQQQQQQQQ 280
Fly 281 QQQQQQQSSSNTTASSNTSASSSAAAASLSAAVAASAATSSNGLFDGTAQAYSSGGSGGGGGGGS 345
Fly 346 GSGGYDTSSYASYHHAAAHHQAAAVAAANMFQSSSVAAAAVRHSMAAAQAHHHHHHHHSGHHHSG 410
Fly 411 SSSGLHGLGGSVGGTAGMGSMSGNSGGAGSLSGHSGAGSNAGSNCLDVKPVRTKPRTSAEGRECV 475
Fly 476 NCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTT 540
Fly 541 TTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLGGGCLPIGGH 605
Fly 606 LGMGDFKPLDPSKGFG-GGFSASMAQHGHLSSGLHPAH 642 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
grn | NP_001262366.1 | ZnF_GATA | 470..517 | CDD:214648 | 45/46 (98%) |
ZnF_GATA | 473..517 | CDD:238123 | 42/43 (98%) | ||
ZnF_GATA | 529..578 | CDD:214648 | 44/48 (92%) | ||
ZnF_GATA | 533..583 | CDD:238123 | 45/49 (92%) | ||
Gata3 | NP_579827.1 | ZnF_GATA | 263..313 | CDD:238123 | 48/55 (87%) |
ZnF_GATA | 317..367 | CDD:238123 | 45/49 (92%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 82 | 1.000 | Domainoid score | I8228 |
eggNOG | 1 | 0.900 | - | - | E1_COG5641 | |
Hieranoid | 1 | 1.000 | - | - | ||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 1 | 1.050 | 285 | 1.000 | Inparanoid score | I2772 |
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D1240204at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000130 | |
OrthoInspector | 1 | 1.000 | - | - | otm46371 | |
orthoMCL | 1 | 0.900 | - | - | OOG6_109197 | |
Panther | 1 | 1.100 | - | - | O | PTHR10071 |
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 1 | 1.000 | - | - | X385 | |
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 1 | 0.960 | - | - | ||
13 | 12.830 |