DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment grn and DAL80

DIOPT Version :10

Sequence 1:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_012959.1 Gene:DAL80 / 853904 SGDID:S000001742 Length:269 Species:Saccharomyces cerevisiae


Alignment Length:110 Identity:40/110 - (36%)
Similarity:54/110 - (49%) Gaps:28/110 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   533 SCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKS-------- 589
            :|.||.|..|.||||:..|..:||||||:.|||...||:::|.:.|::||||..:.:        
Yeast    30 TCQNCFTVKTPLWRRDEHGTVLCNACGLFLKLHGEPRPISLKTDTIKSRNRKKLNNNNVNTNANT 94

  Fly   590 ---------KKKKGL---GGGCLPIGG--------HLGMGDFKPL 614
                     |:||.|   |||.||...        .:..|..|||
Yeast    95 HSNDPNKIFKRKKRLLTTGGGSLPTNNPKVSILEKFMVSGSIKPL 139

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grnNP_001262366.1 ZnF_GATA 473..517 CDD:238123
ZnF_GATA 533..583 CDD:238123 24/49 (49%)
DAL80NP_012959.1 GAT1 <1..269 CDD:227928 40/110 (36%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.