DRSC/TRiP Functional Genomics Resources

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Protein Alignment grn and ARR15

DIOPT Version :10

Sequence 1:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_177627.1 Gene:ARR15 / 843828 AraportID:AT1G74890 Length:206 Species:Arabidopsis thaliana


Alignment Length:46 Identity:16/46 - (34%)
Similarity:25/46 - (54%) Gaps:6/46 - (13%)


- Green bases have known domain annotations that are detailed below.


  Fly   229 IKPSIQNGSASGSSGSGTTHTSTPK---QREGTASTTNSSSNSSSS 271
            :|..|..|   |.:..|.|...:||   |.:..:|.::||::||||
plant   141 LKELIMRG---GEAEEGKTKKLSPKRILQNDIDSSPSSSSTSSSSS 183

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grnNP_001262366.1 ZnF_GATA 473..517 CDD:238123
ZnF_GATA 533..583 CDD:238123
ARR15NP_177627.1 REC_typeA_ARR 20..141 CDD:381119 16/46 (35%)
Blue background indicates that the domain is not in the aligned region.

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