Protein Alignment grn and GNC

DIOPT Version :9

• Sequence 1: NP_001262366.1
• Gene: grn / 40962
• FlyBaseID: FBgn0001138
• Length: 712
• Species: Drosophila melanogaster
• Sequence 2: NP_200497.1
• Gene: GNC / 835788
• AraportID: AT5G56860
• Length: 398
• Species: Arabidopsis thaliana
• Alignment Length: 313
• Identity: 59/313 - (18%)
• Similarity: 93/313 - (29%)
• Gaps: 133/313 - (42%)

  Fly   388 HSMAAAQAHHHHHHHHSGHHHSGSSSGLHGLGGSVGGTAGMGSMSGNSGGAGSLSGH-------- 444
            :.:.::.:.|||||||  ||...|:|                  |.:|....|||.:
plant    24 YPLGSSSSLHHHHHHH--HHQVPSNS------------------SSSSSSISSLSSYLPFLINSQ 68

  Fly   445 ----------------------------SGAGSNAGSNCLDVKPVR------------------- 462
                                        :..||:|..:.:..|..|
plant    69 EDQHVAYNNTYHADHLHLSQPLKAKMFVANGGSSACDHMVPKKETRLKLTIRKKDHEDQPHPLHQ 133

  Fly   463 --TKP-----------------RTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMN--- 505
              |||                 :|....::.::    .|.......:.||..|     :|.|
plant   134 NPTKPDSDSDKWLMSPKMRLIKKTITNNKQLID----QTNNNNHKESDHYPLN-----HKTNFDE 189

  Fly   506 ------GQNRPLIKPKRRLTLQSLQSAAKRAGTS--------CANCKTTTTTLWRRNASG-EPVC 555
                  .....|.:.....|.::..:.....|.|        |::|.||.|.|||....| :.:|
plant   190 DHHEDLNFKNVLTRKTTAATTENRYNTINENGYSNNNGVIRVCSDCNTTKTPLWRSGPRGPKSLC 254

  Fly   556 NACGLYYKLHNVNRPLTM-------KKEGIQTRNRKLSSKSK---KKKGLGGG 598
            ||||:  :.....|....       ::..:..|.::|..|.|   |||...||
plant   255 NACGI--RQRKARRAAMAAAAAAGDQEVAVAPRVQQLPLKKKLQNKKKRSNGG 305

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
grn	NP_001262366.1	ZnF_GATA	470..517	CDD:214648	7/55 (13%)
		ZnF_GATA	473..517	CDD:238123	7/52 (13%)
		ZnF_GATA	529..578	CDD:214648	17/64 (27%)
		ZnF_GATA	533..583	CDD:238123	17/65 (26%)
GNC	NP_200497.1	GAT1	<180..>259	CDD:227928	20/83 (24%)
		ZnF_GATA	227..>263	CDD:214648	14/37 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5641
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810