DRSC/TRiP Functional Genomics Resources

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Protein Alignment grn and PRR7

DIOPT Version :10

Sequence 1:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_568107.1 Gene:PRR7 / 831793 AraportID:AT5G02810 Length:727 Species:Arabidopsis thaliana


Alignment Length:495 Identity:100/495 - (20%)
Similarity:185/495 - (37%) Gaps:98/495 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SSGGGNGGGVSPQTNGLGSAGSSLAHSHHSLSSGASSAGSSVGVGSALGGGGGSGLDTSDMSAFY 89
            |||.|:..|.......:.|  .|:..|.....|...:...|:|:.::.|...|||..:|......
plant   203 SSGSGSESGTHQTQKSVKS--KSIKKSDQDSGSSDENENGSIGLNASDGSSDGSGAQSSWTKKAV 265

  Fly    90 ALESNGHHRRYYPSYHQHTSRMPST-----HASPQVCRPHFHTPLSPWLTSEH-KSFAPASAWSM 148
            .::.:       |.......|:.||     |::|:........|.:...|.|| ..|...   :|
plant   266 DVDDS-------PRAVSLWDRVDSTCAQVVHSNPEFPSNQLVAPPAEKETQEHDDKFEDV---TM 320

  Fly   149 GQFA-------C-----PQEPQVEHKLGQMGQSH---QTTAAGQHSFPFPPTPPKDSTPDSVQ-- 196
            |:..       |     |::..:....|.|.|.:   ::::..:......|......:|.|.|  
plant   321 GRDLEISIRRNCDLALEPKDEPLSKTTGIMRQDNSFEKSSSKWKMKVGKGPLDLSSESPSSKQMH 385

  Fly   197 -TGPSEYQAVMNAFMHQQA-----TGSTSLTDASCALDIKPSIQNGSASGSSGSGTTHTST---- 251
             .|.|.::|:.:.....:.     |...:|.....::.|...:.:...|.....||....|    
plant   386 EDGGSSFKAMSSHLQDNREPEAPNTHLKTLDTNEASVKISEELMHVEHSSKRHRGTKDDGTLVRD 450

  Fly   252 ----PKQREGTA-STTNSSSNSS-------SSQQQQQQQQQQQQQQQQSSSNTTASSNTSASSSA 304
                .::.||:| |..|.:||::       .|...|....|...::.:::.:..::.|.|...:.
plant   451 DRNVLRRSEGSAFSRYNPASNANKISGGNLGSTSLQDNNSQDLIKKTEAAYDCHSNMNESLPHNH 515

  Fly   305 AAASLSAAVAASAATSSNGLFDGTAQAYSSGGSGGGGGGGSGSGGYDT---------SSYASY-- 358
            .:...|.....|:.|.:|        |::..|:......||.|..:.:         :::|||  
plant   516 RSHVGSNNFDMSSTTENN--------AFTKPGAPKVSSAGSSSVKHSSFQPLPCDHHNNHASYNL 572

  Fly   359 -HHAAAHHQAAAVAAANMFQ-----SSSVAAAAVRHSMAAAQAHHHHHHHHSGHHHS---GSSSG 414
             |.|..........::|::.     :::....:|..|::.           |||..:   |||:|
plant   573 VHVAERKKLPPQCGSSNVYNETIEGNNNTVNYSVNGSVSG-----------SGHGSNGPYGSSNG 626

  Fly   415 LHGLGGSVGGTAGMGSMSGNSGGAGSLSGHSGAGSNAGSN 454
            ::..|.::|...|.|. :||..|:||.|| ||:|:.|..|
plant   627 MNAGGMNMGSDNGAGK-NGNGDGSGSGSG-SGSGNLADEN 664

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grnNP_001262366.1 ZnF_GATA 473..517 CDD:238123
ZnF_GATA 533..583 CDD:238123
PRR7NP_568107.1 psREC_PRR 80..183 CDD:381120
CCT 669..711 CDD:461849
Blue background indicates that the domain is not in the aligned region.

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