DRSC/TRiP Functional Genomics Resources

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Protein Alignment grn and AT5G14370

DIOPT Version :10

Sequence 1:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_568300.1 Gene:AT5G14370 / 831288 AraportID:AT5G14370 Length:339 Species:Arabidopsis thaliana


Alignment Length:360 Identity:74/360 - (20%)
Similarity:121/360 - (33%) Gaps:90/360 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   225 CALDIKPSIQNGSASGSSGSGTTHTSTPKQREGTASTT----NSSSNSSSSQQQQQQQQQQQQQQ 285
            |:....|.:      |.....|..:...|:|:...:||    .||||..:|::.:.:.::.:...
plant     2 CSNKASPVV------GEEKQSTRSSKRIKKRKNREATTTMEDKSSSNLDASRKIRTKTKKPKFLS 60

  Fly   286 QQSSSNTTASSNTSASSSAAAASLSAAVAASAATSSNGLFDGTAQAYSSGGSGGGGGGGSGSGGY 350
            .:...||:...|.:..|..:....:....:.........|....:|.::...   |||......|
plant    61 LKLELNTSHEINENPRSKKSKKKNNNKKQSKKKEPDTTPFKEKKRAETTTTL---GGGEKEEEQY 122

  Fly   351 DTSSYASYHHAAAHHQAAAVAAANMFQSSSVAAAAVRHSMAAAQA--------HHHHHHHHSGHH 407
            ||                  .||.:|.|::.:..:..|.:..:.|        ..::...:....
plant   123 DT------------------VAAYLFNSATDSTISSIHDLLPSSAATDVDCGGERNNLSPYDRQD 169

  Fly   408 HSGSSSGLHGLGGSVGGT-----------------AGMGSMSGNSGGAGSLSGHSG--------- 446
            |..|||.|.......|.:                 ..:.|.||.....|...|:.|         
plant   170 HGSSSSSLLRTAMRKGASEEEETTEERWVSYSEVVEEVMSRSGTPRCCGGGDGNDGRPSLALKLD 234

  Fly   447 ------AGSNAGSNCLDVKPVRTKPRTSA------EGRECVNCGA-----TSTPLWRRDGTGHYL 494
                  |.|:.|:..:|.:|.:|.|...|      :|.|..|..|     |:..|||    ||. 
plant   235 YEQIMEAWSDKGTLYVDGEPPQTVPDLHASADGFNDGGEAGNLWAVPEMETTERLWR----GHR- 294

  Fly   495 CNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKR 529
             .|..|.||...||| |...:.|..::.| :|.||
plant   295 -EASLLRYKEKRQNR-LFSKRIRYQVRKL-NAEKR 326

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grnNP_001262366.1 ZnF_GATA 473..517 CDD:238123 17/48 (35%)
ZnF_GATA 533..583 CDD:238123
AT5G14370NP_568300.1 CCT 294..337 CDD:461849 13/37 (35%)
Blue background indicates that the domain is not in the aligned region.

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