DRSC/TRiP Functional Genomics Resources

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Protein Alignment grn and GATA7

DIOPT Version :10

Sequence 1:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_195347.1 Gene:GATA7 / 829781 AraportID:AT4G36240 Length:238 Species:Arabidopsis thaliana


Alignment Length:100 Identity:26/100 - (26%)
Similarity:36/100 - (36%) Gaps:41/100 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   455 CLDVKPVRTKPRTSA---------------------EGRE------------------CVNCGAT 480
            |:.|||...:.||:.                     .||:                  |.:||..
plant   108 CVPVKPRSKRRRTNGRIWSMESPSPLLSTAVARRKKRGRQKVDASYGGVVQQQQLRRCCSHCGVQ 172

  Fly   481 STPLWRRDGTG-HYLCNACGLYYKMNGQNRPLIKP 514
            .||.||....| ..||||||:.:| :|:..|..:|
plant   173 KTPQWRMGPLGAKTLCNACGVRFK-SGRLLPEYRP 206

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grnNP_001262366.1 ZnF_GATA 473..517 CDD:238123 17/60 (28%)
ZnF_GATA 533..583 CDD:238123
GATA7NP_195347.1 ZnF_GATA 164..214 CDD:214648 17/43 (40%)
Blue background indicates that the domain is not in the aligned region.

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