Protein Alignment grn and CGA1

DIOPT Version :9

• Sequence 1: NP_001262366.1
• Gene: grn / 40962
• FlyBaseID: FBgn0001138
• Length: 712
• Species: Drosophila melanogaster
• Sequence 2: NP_194345.1
• Gene: CGA1 / 828721
• AraportID: AT4G26150
• Length: 352
• Species: Arabidopsis thaliana
• Alignment Length: 357
• Identity: 73/357 - (20%)
• Similarity: 120/357 - (33%)
• Gaps: 103/357 - (28%)

  Fly   264 SSSNSSSSQQQQQQQQQQQQQQQQSSSNTTASSNTSASSSAAAASLSAAVAASAATSSNGLFDGT 328
            :|..||.....||||||||....|:|||         .||..:.|||.......:...
plant    22 ASLGSSLHHHLQQQQQQQQHFHHQASSN---------PSSLMSPSLSYFPFLINSRQD------- 70

  Fly   329 AQAYSSGGSGGGGGGGSGSGGYDTSSYASYHHAAAHHQAAAVAAANMF----QSSS---VAAAAV 386
             |.|.               ||:.:   ::|.....|.:..:...|..    .|||   |.....
plant    71 -QVYV---------------GYNNN---TFHDVLDTHISQPLETKNFVSDGGSSSSDQMVPKKET 116

  Fly   387 RHSMAAAQAHHHHHHHHSGHHHSGSSSGLHGL------------GGSVGGTAGMGSMSGNSGGAG 439
            |..:...:..:|..............:|.:.|            ..::..|:.......|:..:.
plant   117 RLKLTIKKKDNHQDQTDLPQSPIKDMTGTNSLKWISSKVRLMKKKKAIITTSDSSKQHTNNDQSS 181

  Fly   440 SLSGHSGAGSNAGSNCLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTG-HYLCNACGLYYK 503
            :|| :|...:...::|:.              |.|.:|..|.|||||....| ..||||||:..:
plant   182 NLS-NSERQNGYNNDCVI--------------RICSDCNTTKTPLWRSGPRGPKSLCNACGIRQR 231

  Fly   504 MNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLY------- 561
                     |.:|         ||....|:.|....:...:.::..:...:.|  |:|
plant   232 ---------KARR---------AAMATATATAVSGVSPPVMKKKMQNKNKISN--GVYKILSPLP 276

  Fly   562 YKLHNVNRPLTMKKEGI------QTRNRKLSS 587
            .|::...|.:|:::..:      |:.:..|||
plant   277 LKVNTCKRMITLEETALAEDLETQSNSTMLSS 308

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
grn	NP_001262366.1	ZnF_GATA	470..517	CDD:214648	17/47 (36%)
		ZnF_GATA	473..517	CDD:238123	16/44 (36%)
		ZnF_GATA	529..578	CDD:214648	8/55 (15%)
		ZnF_GATA	533..583	CDD:238123	8/62 (13%)
CGA1	NP_194345.1	ZnF_GATA	198..>230	CDD:214648	16/45 (36%)
		GATA	201..230	CDD:278735	15/28 (54%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG5641
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.810