Protein Alignment grn and COL2

DIOPT Version :10

• Sequence 1: NP_001262366.1
• Gene: grn / 40962
• FlyBaseID: FBgn0001138
• Length: 712
• Species: Drosophila melanogaster
• Sequence 2: NP_186887.1
• Gene: COL2 / 821298
• AraportID: AT3G02380
• Length: 347
• Species: Arabidopsis thaliana
• Alignment Length: 290
• Identity: 63/290 - (21%)
• Similarity: 100/290 - (34%)
• Gaps: 97/290 - (33%)

  Fly   442 SGHSGAGSNAGSNCLDVKPVRTKPRTSAEGREC-VNCGATSTPLWRRDGTGHYLCNACGLYYKMN 505
            |..||..:.|...|          |::|    | |.|.|.|.          |||..|..  :::
plant     6 SNESGTWARACDTC----------RSAA----CTVYCEADSA----------YLCTTCDA--RVH 44

  Fly   506 GQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRP 570
            ..||...:.:|....||.:||     .:...||....:|          |.||..  ::|:.| |
plant    45 AANRVASRHERVRVCQSCESA-----PAAFLCKADAASL----------CTACDA--EIHSAN-P 91

  Fly   571 LTMKKEGIQTRNRKLSSKS------------KKKKGLGGGCLP-IGGHLGMGDFKPLDPSKGFGG 622
            |..:.:.:.......:|.|            :..:.:....|| .|.::|       :.:.||..
plant    92 LARRHQRVPILPLSANSCSSMAPSETDADNDEDDREVASWLLPNPGKNIG-------NQNNGFLF 149

  Fly   623 G--------FSASMAQHGHLSSGLHPAHAHMHGSWYTGGMGALGASSGLQGGFSTAGSLSGAVVP 679
            |        :|:||......:.     :.|...|:  ||.|.:    .||...||:     .:..
plant   150 GVEYLDLVDYSSSMDNQFEDNQ-----YTHYQRSF--GGDGVV----PLQVEESTS-----HLQQ 198

  Fly   680 HSQPYHLGLSSMGTWRTDYTXWSGNNLNNN 709
            ..|.:.||:        :|...||.:.|||
plant   199 SQQNFQLGI--------NYGFSSGAHYNNN 220

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
grn	NP_001262366.1	ZnF_GATA	473..517	CDD:238123	11/44 (25%)
		ZnF_GATA	533..583	CDD:238123	10/49 (20%)
COL2	NP_186887.1	Bbox1_BBX-like	15..58	CDD:380879	16/68 (24%)
		Bbox1_BBX-like	58..101	CDD:380879	14/60 (23%)
		CCT	278..320	CDD:461849