DRSC/TRiP Functional Genomics Resources

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Protein Alignment grn and PRR9

DIOPT Version :10

Sequence 1:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_566085.1 Gene:PRR9 / 819292 AraportID:AT2G46790 Length:468 Species:Arabidopsis thaliana


Alignment Length:165 Identity:41/165 - (24%)
Similarity:61/165 - (36%) Gaps:36/165 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly   189 DSTPDSVQTGPSEYQAV------------------MNAFMHQQATGSTSLTDASCALDIKPSIQN 235
            |..|||:....|..:.|                  .:...||:    .||:|||.....:.|...
plant   238 DKRPDSIYKDKSRDECVGPELGLSLKRSCSVSFENQDESKHQK----LSLSDASAFSRFEESKSA 298

  Fly   236 GSA-----SGSSGSGTTHT-STPKQR-----EGTASTTNSSSN---SSSSQQQQQQQQQQQQQQQ 286
            ..|     ..:||...|.| |..|.|     :|:|:|:::..|   ||.|.:.|..|.....|:|
plant   299 EKAVVALEESTSGEPKTPTESHEKLRKVTSDQGSATTSSNQENIGSSSVSFRNQVLQSTVTNQKQ 363

  Fly   287 QSSSNTTASSNTSASSSAAAASLSAAVAASAATSS 321
            .|.....::...:||....|.|.|.....:..:||
plant   364 DSPIPVESNREKAASKEVEAGSQSTNEGIAGQSSS 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grnNP_001262366.1 ZnF_GATA 473..517 CDD:238123
ZnF_GATA 533..583 CDD:238123
PRR9NP_566085.1 psREC_PRR 39..142 CDD:381120
CCT 417..458 CDD:461849
Blue background indicates that the domain is not in the aligned region.

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