DRSC/TRiP Functional Genomics Resources

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Protein Alignment grn and AT2G46670

DIOPT Version :10

Sequence 1:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_182190.2 Gene:AT2G46670 / 819279 AraportID:AT2G46670 Length:183 Species:Arabidopsis thaliana


Alignment Length:91 Identity:26/91 - (28%)
Similarity:38/91 - (41%) Gaps:6/91 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   237 SASGSSGSGT-THTSTPKQREGTASTTNSSS-----NSSSSQQQQQQQQQQQQQQQQSSSNTTAS 295
            |.||...:.| :|....|.|....|:|.||:     :||.|.:.|..|.....|:|.|.....::
plant    23 STSGEPKTPTESHEKLRKVRSDQGSSTTSSNQENIGSSSVSFRNQVLQSTVTNQKQDSPIPVESN 87

  Fly   296 SNTSASSSAAAASLSAAVAASAATSS 321
            ...:||....|.|.|.....:..:||
plant    88 REKAASKEVEAGSQSTNEGIAGQSSS 113

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grnNP_001262366.1 ZnF_GATA 473..517 CDD:238123
ZnF_GATA 533..583 CDD:238123
AT2G46670NP_182190.2 CCT 132..173 CDD:461849
Blue background indicates that the domain is not in the aligned region.

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