Protein Alignment grn and RR12

DIOPT Version :10

• Sequence 1: NP_001262366.1
• Gene: grn / 40962
• FlyBaseID: FBgn0001138
• Length: 712
• Species: Drosophila melanogaster
• Sequence 2: NP_180090.6
• Gene: RR12 / 817056
• AraportID: AT2G25180
• Length: 596
• Species: Arabidopsis thaliana
• Alignment Length: 294
• Identity: 58/294 - (19%)
• Similarity: 85/294 - (28%)
• Gaps: 110/294 - (37%)

  Fly    26 SGGGN--GGGVSP------QTNGLGSAGSSLAHSHHSLSSGASSAGSSVGVGSALGGGGGSGLDT 82
            |.|||  .|...|      |||.         :...:::|..|.||:|:...|         ..|
plant   350 SDGGNILQGLPMPLEFDQLQTNN---------NKSRNMNSNKSIAGTSMAFPS---------FST 396

  Fly    83 SDMSAFYALESN-----GHHRRYYPSY--HQHTSRMPSTHASPQVCRPHFHTPLSPWLTSEHKSF 140
            ...|...|..:|     ||.:...|.:  ||...|:                        ||
plant   397 QQNSLISAPNNNVVVLEGHPQATPPGFPGHQINKRL------------------------EH--- 434

  Fly   141 APASAWSMGQFACPQEPQVEHKLGQMGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQAV 205
                 ||....:....|...|....:          .|.|...|.|  .|.||     |.|:..|
plant   435 -----WSNAVSSSTHPPPPAHNSNSI----------NHQFDVSPLP--HSRPD-----PLEWNNV 477

  Fly   206 MNAFMHQQATGSTSLTD---------ASCA---LDIKPSIQNGSASGSSGSGTTHTSTPKQREG- 257
            .:::.......:.:|:.         |.|.   .|...::|.|...|.|.......|:...:||
plant   478 SSSYSIPFCDSANTLSSPALDTTNPRAFCRNTDFDSNTNVQPGVFYGPSTDAMALLSSSNPKEGF 542

  Fly   258 ---------------TASTTNSSSNSSSSQQQQQ 276
                           .|.:.:...||:..|:|.|
plant   543 VVGQQKLQSGGFMVADAGSLDDIVNSTMKQEQSQ 576

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
grn	NP_001262366.1	ZnF_GATA	473..517	CDD:238123
		ZnF_GATA	533..583	CDD:238123
RR12	NP_180090.6	REC_typeB_ARR-like	19..133	CDD:381121
		myb_SHAQKYF	195..248	CDD:130620