Sequence 1: | NP_001262366.1 | Gene: | grn / 40962 | FlyBaseID: | FBgn0001138 | Length: | 712 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001019487.1 | Gene: | Gata5 / 499951 | RGDID: | 1561365 | Length: | 404 | Species: | Rattus norvegicus |
Alignment Length: | 317 | Identity: | 127/317 - (40%) |
---|---|---|---|
Similarity: | 154/317 - (48%) | Gaps: | 87/317 - (27%) |
- Green bases have known domain annotations that are detailed below.
Fly 304 AAAASLSAAVAASAATSSNGLFDGTAQ----------AYSSGGSGGGGGGGSGSGGYDTSSYASY 358
Fly 359 HHAAAHHQAAAVAAANMFQSS--SVAAAAVRHSMAAAQAHHHHHHHHSGHHHSG--SSSGLHGLG 419
Fly 420 GSVGGTAGMGSMSGNSGGAGSLSGHSGAGSNAGSNCLDVKPVRTKPRTS----------AEGREC 474
Fly 475 VNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKT 539
Fly 540 TTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLG 596 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
grn | NP_001262366.1 | ZnF_GATA | 470..517 | CDD:214648 | 40/46 (87%) |
ZnF_GATA | 473..517 | CDD:238123 | 37/43 (86%) | ||
ZnF_GATA | 529..578 | CDD:214648 | 37/48 (77%) | ||
ZnF_GATA | 533..583 | CDD:238123 | 39/49 (80%) | ||
Gata5 | NP_001019487.1 | GATA-N | 1..181 | CDD:283099 | 38/178 (21%) |
ZnF_GATA | 191..236 | CDD:214648 | 39/44 (89%) | ||
ZnF_GATA | 195..239 | CDD:238123 | 37/43 (86%) | ||
ZnF_GATA | 245..294 | CDD:214648 | 37/48 (77%) | ||
ZnF_GATA | 250..300 | CDD:238123 | 39/49 (80%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000130 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.910 |