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Protein Alignment grn and gata3

DIOPT Version :9

Sequence 1:	NP_001262366.1	Gene:	grn / 40962	FlyBaseID:	FBgn0001138	Length:	712	Species:	Drosophila melanogaster
Sequence 2:	NP_571286.1	Gene:	gata3 / 30458	ZFINID:	ZDB-GENE-990415-82	Length:	438	Species:	Danio rerio

Alignment Length:	617	Identity:	203/617 - (32%)
Similarity:	255/617 - (41%)	Gaps:	239/617 - (38%)

- Green bases have known domain annotations that are detailed below.

  Fly    74 GGGGSGLDTS------DMSAFYALESNGHHRRYYPSYHQHTSRMPSTHASPQVCRPHFHTPLSPW 132
            |.|.|.:|.|      |:...:.::...:| .||.:..:...|.|....|.|:|||.......||
Zfish    26 GLGHSYMDPSQYQLAEDVDVLFNIDGQSNH-PYYGNPVRAVQRYPPPPHSSQMCRPSLLHGSLPW 89

  Fly   133 LTSEHKSFAP---ASAWSMGQFACPQEPQVEHKLGQMG----QSHQTTAAGQ---HSFPFPPTPP 187
            |.. .||..|   .|.|::|.|  |:........|.:.    .|..:.:||.   |.|.||||||
Zfish    90 LDG-GKSIGPHHSTSPWNLGPF--PKTSLHHSSPGPLSVYPPASSSSLSAGHSSPHLFTFPPTPP 151

  Fly   188 KDSTPDSVQTGPSEYQAVMNAFMHQQATGSTSLTDASCALDIKPSIQNGSASGSSGSGTTHTSTP 252
            ||.:||                                     |:|      .:||||
Zfish   152 KDVSPD-------------------------------------PAI------STSGSG------- 166

  Fly   253 KQREGTASTTNSSSNSSSSQQQQQQQQQQQQQQQQSSSNTTASSNTSASSSAAAASLSAAVAASA 317
                            ||.:|:.::..:.|....:|....:|.|.:.||.
Zfish   167 ----------------SSVRQEDKECIKYQVSLAESMKLDSAHSRSMASI--------------- 200

  Fly   318 ATSSNGLFDGTAQAYSSGGSGGGGGGGSGSGGYDTSSYASYHHAAAHHQAAAVAAANMFQSSSVA 382
                                    |.|:.|..:..::|.||         .......:|..||:
Zfish   201 ------------------------GAGASSAHHPIATYPSY---------VPDYGPGLFPPSSL- 231

  Fly   383 AAAVRHSMAAAQAHHHHHHHHSGHHHSGSSSGLHGLGGSVGGTAGMGSMSGNSGGAGSLSGHSGA 447
                                               :|||
Zfish   232 -----------------------------------IGGS-------------------------- 235

  Fly   448 GSNAGSNCLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLI 512
            .|:.||.      .|.|.|:|:||||||||||||||||||||||||||||||||:||||||||||
Zfish   236 SSSYGSK------TRPKTRSSSEGRECVNCGATSTPLWRRDGTGHYLCNACGLYHKMNGQNRPLI 294

  Fly   513 KPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMKKEG 577
            ||||||      |||:|||||||||:|||||||||||:|:||||||||||||||:||||||||||
Zfish   295 KPKRRL------SAARRAGTSCANCQTTTTTLWRRNANGDPVCNACGLYYKLHNINRPLTMKKEG 353

  Fly   578 IQTRNRKLSSKSKKKKGLGGGCLPIGGHLGMGDFKP--LDPSKGFGGGFSASMAQH--------- 631
            |||||||:||||||.|         ..|..|.||..  ::.:..|.   .|::::|
Zfish   354 IQTRNRKMSSKSKKSK---------KSHDSMEDFSKSLMEKNSSFS---PAALSRHMTSFPPFSH 406

  Fly   632 -GHLSSGLHPAH-------AHMHGSWYTGGMG 655
             ||:.:...|.|       |..|.|.....||
Zfish   407 SGHMLTTPTPMHPSSSLPFASHHPSSMVTAMG 438

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 591.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.