DRSC/TRiP Functional Genomics Resources

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Protein Alignment grn and GATA6

DIOPT Version :9

Sequence 1:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_005248.2 Gene:GATA6 / 2627 HGNCID:4174 Length:595 Species:Homo sapiens


Alignment Length:631 Identity:207/631 - (32%)
Similarity:264/631 - (41%) Gaps:179/631 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    30 NGGGVSPQTNGLGSAGSSLAHSH-------HSLSSGASSAGSSVGVGSALGGGGGSGLDTSDMSA 87
            :||...|:.  .|:||:..:.|.       .:..|..||:.||...|...|.||.|...|..:..
Human     5 DGGWCLPKR--FGAAGADASDSRAFPAREPSTPPSPISSSSSSCSRGGERGPGGASNCGTPQLDT 67

  Fly    88 FYALESNGHHRR--YYPSYHQHTSRMPSTHASPQVCRPHFHTPLSPW----LTSEHKSFAPAS-- 144
            ..|.   |...|  ...||..|....|...::|.|..|..:  ||.|    |.::....|.||  
Human    68 EAAA---GPPARSLLLSSYASHPFGAPHGPSAPGVAGPGGN--LSSWEDLLLFTDLDQAATASKL 127

  Fly   145 AWS-----MGQFACPQEPQVEHKLGQMGQSHQTTAAGQHSFPFPPTPPKDSTPDSVQTGPSEYQA 204
            .||     :..|| |::|:         :.:||.||                  ....||:.|..
Human   128 LWSSRGAKLSPFA-PEQPE---------EMYQTLAA------------------LSSQGPAAYDG 164

  Fly   205 VMNAFMHQQATGSTSLTDASCALDIKPSIQNGS----------ASGS-----SGSGTTHTSTPKQ 254
            ....|:|..|..:.:...||..:.: |:.:.||          .|||     :|....|...|  
Human   165 APGGFVHSAAAAAAAAAAASSPVYV-PTTRVGSMLPGLPYHLQGSGSGPANHAGGAGAHPGWP-- 226

  Fly   255 REGTASTTNSSSNSSSSQQQQQQQQQQQQQQQQSSSNTTASSNTSASSSAA----AASLSAAVAA 315
                                          |..:.|....|...:|...||    |.|.:|.|:|
Human   227 ------------------------------QASADSPPYGSGGGAAGGGAAGPGGAGSAAAHVSA 261

  Fly   316 SAATS-SNGLFDGTAQ---AYSSGGSGGGGGGGSGSGGYDTSSYASYHHAAAHHQAAAVAAANMF 376
            ....| |..:.:|.|:   .|::.||||.||   .|||                           
Human   262 RFPYSPSPPMANGAAREPGGYAAAGSGGAGG---VSGG--------------------------- 296

  Fly   377 QSSSVAAAAVRH----SMAAAQ----AHHHHHHHHSGHHHSGSSSGLHGLGGSVGGTAGMGSMSG 433
             .||:||...|.    |::||:    .:|||||||  |||....|...|...:....||    ..
Human   297 -GSSLAAMGGREPQYSSLSAARPLNGTYHHHHHHH--HHHPSPYSPYVGAPLTPAWPAG----PF 354

  Fly   434 NSGGAGSLSGHSGAGSNAGSNCLDVKPVRTKPRTS-----AEGRECVNCGATSTPLWRRDGTGHY 493
            .:....||...:||          ..||...|...     :|.|||||||:..||||||||||||
Human   355 ETPVLHSLQSRAGA----------PLPVPRGPSADLLEDLSESRECVNCGSIQTPLWRRDGTGHY 409

  Fly   494 LCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNAC 558
            ||||||||.||||.:||||||::|:      .:::|.|.|||||.|||||||||||.||||||||
Human   410 LCNACGLYSKMNGLSRPLIKPQKRV------PSSRRLGLSCANCHTTTTTLWRRNAEGEPVCNAC 468

  Fly   559 GLYYKLHNVNRPLTMKKEGIQTRNRKLS--SKSKKKKGLGGGCLPI 602
            |||.|||.|.|||.|||||||||.||..  :|||...|.....:|:
Human   469 GLYMKLHGVPRPLAMKKEGIQTRKRKPKNINKSKTCSGNSNNSIPM 514

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grnNP_001262366.1 ZnF_GATA 470..517 CDD:214648 38/46 (83%)
ZnF_GATA 473..517 CDD:238123 36/43 (84%)
ZnF_GATA 529..578 CDD:214648 40/48 (83%)
ZnF_GATA 533..583 CDD:238123 43/49 (88%)
GATA6NP_005248.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 14..71 15/56 (27%)
GATA-N 147..377 CDD:283099 74/327 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 208..255 13/78 (17%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 286..339 27/85 (32%)
ZnF_GATA 388..435 CDD:214648 38/52 (73%)
ZnF_GATA 389..434 CDD:238123 36/44 (82%)
ZnF_GATA 441..488 CDD:214648 39/46 (85%)
ZnF_GATA 443..494 CDD:238123 43/50 (86%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 482..561 16/33 (48%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG5641
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0000130
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1745
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
43.840

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