DRSC/TRiP Functional Genomics Resources

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Protein Alignment grn and GATA4

DIOPT Version :10

Sequence 1:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_001295022.1 Gene:GATA4 / 2626 HGNCID:4173 Length:443 Species:Homo sapiens


Alignment Length:478 Identity:169/478 - (35%)
Similarity:209/478 - (43%) Gaps:129/478 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   199 PSEYQA-VMNAFMHQQATGSTSL-----TDASCALDIKPSIQNGSASGSSGSGTTHTSTPKQREG 257
            |..|:| ...||||.....|:.:     ...|..|.:. .:|.|.|..:||             |
Human    15 PGAYEAGGPGAFMHGAGAASSPVYVPTPRVPSSVLGLS-YLQGGGAGSASG-------------G 65

  Fly   258 TASTTNSSSNSSSSQQQQQQQQQQQQQQQQSSSNTTASSNTSASSSAAAASLSAAVAASAATSSN 322
            .:..::..:.|.:....||......|.....::.|....:...|......||:||.||:||..  
Human    66 ASGGSSGGAASGAGPGTQQGSPGWSQAGADGAAYTPPPVSPRFSFPGTTGSLAAAAAAAAARE-- 128

  Fly   323 GLFDGTAQAYSSGGSGGGGG-------GGSGSGGYDTSSYASY-HHAAAHHQAAAVAAANMFQSS 379
                  |.||||||...|.|       |.:|..|..:|.|.:| ....|...|||.|:|..|.| 
Human   129 ------AAAYSSGGGAAGAGLAGREQYGRAGFAGSYSSPYPAYMADVGASWAAAAAASAGPFDS- 186

  Fly   380 SVAAAAVRHSMAAAQAHHHHHHHHSGHHHSGSSSGLHGLGGSVGGTAGMGSMSGNSGGAGSLSGH 444
                 .|.||:                                            .|.|...:.|
Human   187 -----PVLHSL--------------------------------------------PGRANPAARH 202

  Fly   445 SGAGSNAGSNCLDVKPVRTKPRTSAEGRECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQNR 509
                    .|.:|:..      ..:||||||||||.|||||||||||||||||||||:||||.||
Human   203 --------PNLVDMFD------DFSEGRECVNCGAMSTPLWRRDGTGHYLCNACGLYHKMNGINR 253

  Fly   510 PLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLWRRNASGEPVCNACGLYYKLHNVNRPLTMK 574
            |||||:|||      ||::|.|.|||||:|||||||||||.|||||||||||.|||.|.|||.|:
Human   254 PLIKPQRRL------SASRRVGLSCANCQTTTTTLWRRNAEGEPVCNACGLYMKLHGVPRPLAMR 312

  Fly   575 KEGIQTRNRKLSSKSKKKKGL---GGGCLPIGGHLGMG----------DFKPLDPSKGFGG--GF 624
            |||||||.||..:.:|.|...   |...||........          :.:|:....|...  |.
Human   313 KEGIQTRKRKPKNLNKSKTPAAPSGSESLPPASGASSNSSNATTSSSEEMRPIKTEPGLSSHYGH 377

  Fly   625 SASMAQ-------HGHLSSGLHP 640
            |:|::|       .|| ...:||
Human   378 SSSVSQTFSVSAMSGH-GPSIHP 399

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grnNP_001262366.1 ZnF_GATA 473..517 CDD:238123 39/43 (91%)
ZnF_GATA 533..583 CDD:238123 42/49 (86%)
GATA4NP_001295022.1 GATA-N 1..205 CDD:461628 59/269 (22%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 60..107 8/59 (14%)
ZnF_GATA 217..267 CDD:238123 44/55 (80%)
ZnF_GATA 271..322 CDD:238123 42/50 (84%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 315..379 15/63 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 410..429
Blue background indicates that the domain is not in the aligned region.

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