DRSC/TRiP Functional Genomics Resources

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Protein Alignment grn and Gata5

DIOPT Version :10

Sequence 1:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_032119.2 Gene:Gata5 / 14464 MGIID:109497 Length:404 Species:Mus musculus


Alignment Length:442 Identity:146/442 - (33%)
Similarity:175/442 - (39%) Gaps:184/442 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly   198 GPSEYQAVMNAFMHQQATGS---TSLTDASCALDIKPSIQNGSASGSSGSGTTHTSTPKQREGTA 259
            |...| |...||:|...|||   .:.|.....|...||.:.||                      
Mouse    12 GQGTY-ADSGAFLHSSGTGSPVFVAPTRMPSMLPYLPSCEPGS---------------------- 53

  Fly   260 STTNSSSNSSSSQQQQQQQQQQQQQQQQSSSNTTASSNTSASSSAAAASLSAAVAASAATSSNGL 324
                                                   .|.:.||.:|.:.||||.::...:|.
Mouse    54 ---------------------------------------QAPALAAHSSWTQAVAADSSAFGSGS 79

  Fly   325 FDGTAQ----------AYSSGGSGGGGGGGSGSGG-----------YDT-------SSYASYHHA 361
            ....|.          |:|..|||.||..|...||           |.|       :||.:.:.|
Mouse    80 PHPPAAHPPGATTFPFAHSPPGSGSGGSAGVRDGGAFQGALLAREQYPTPLGRPMGASYPTTYPA 144

  Fly   362 AAHHQAAAVAAANMFQSSSVAAAAVRHSMAAAQAHHHHHHHHSGHHHSGS--SSGLHGLGGSVGG 424
                          :.||.||.:..                      ||:  ||.||||....||
Mouse   145 --------------YMSSDVAPSWT----------------------SGAFDSSILHGLQARPGG 173

  Fly   425 TAGMGSMSGNSGGAGSLSGHSGAGSNAGSNCLDVKPVRTKPRTS----------AEGRECVNCGA 479
            ..|.                                     |||          .||||||||||
Mouse   174 LPGR-------------------------------------RTSFVPDFLEEFPGEGRECVNCGA 201

  Fly   480 TSTPLWRRDGTGHYLCNACGLYYKMNGQNRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTL 544
            .|||||||||||||||||||||:||||.||||::|::||      |:::|:|..|:||.|.||||
Mouse   202 LSTPLWRRDGTGHYLCNACGLYHKMNGVNRPLVRPQKRL------SSSRRSGLCCSNCHTATTTL 260

  Fly   545 WRRNASGEPVCNACGLYYKLHNVNRPLTMKKEGIQTRNRKLSSKSKKKKGLG 596
            ||||:.|||||||||||.|||.|.|||.||||.||||.||..:.:|.|...|
Mouse   261 WRRNSEGEPVCNACGLYMKLHGVPRPLAMKKESIQTRKRKPKNPAKIKGSSG 312

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grnNP_001262366.1 ZnF_GATA 473..517 CDD:238123 37/43 (86%)
ZnF_GATA 533..583 CDD:238123 38/49 (78%)
Gata5NP_032119.2 GATA-N 1..181 CDD:461628 57/303 (19%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 71..112 10/40 (25%)
ZnF_GATA 195..239 CDD:238123 37/43 (86%)
ZnF_GATA 250..300 CDD:238123 38/49 (78%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 293..332 9/20 (45%)

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