DRSC/TRiP Functional Genomics Resources

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Protein Alignment grn and Zglp1

DIOPT Version :10

Sequence 1:NP_001262366.1 Gene:grn / 40962 FlyBaseID:FBgn0001138 Length:712 Species:Drosophila melanogaster
Sequence 2:NP_001417437.1 Gene:Zglp1 / 100360291 RGDID:2322460 Length:266 Species:Rattus norvegicus


Alignment Length:126 Identity:35/126 - (27%)
Similarity:45/126 - (35%) Gaps:46/126 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly   452 GSNCLDVKPVRTKP--------RTSAEG-RECVNCGATSTPLWRRDGTGHYLCNACGLYYKMNGQ 507
            |.:|....|  |.|        .|.|.| |.|.:|....|||||....|..||||||:.|     
  Rat   168 GRSCSQKLP--TSPSKALASPGSTEALGPRRCASCRTQRTPLWRDAEDGTPLCNACGIRY----- 225

  Fly   508 NRPLIKPKRRLTLQSLQSAAKRAGTSCANCKTTTTTLW---RRNASGEPVCNACGLYYKLH 565
                                |:.||.|::|       |   |::.....:|..||:....|
  Rat   226 --------------------KKYGTRCSSC-------WLVPRKSIQPRRLCGRCGVSQDPH 259

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
grnNP_001262366.1 ZnF_GATA 473..517 CDD:238123 15/43 (35%)
ZnF_GATA 533..583 CDD:238123 8/36 (22%)
Zglp1NP_001417437.1 None

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