DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl8 and ARL1

DIOPT Version :9

Sequence 1:NP_001287225.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_009723.3 Gene:ARL1 / 852462 SGDID:S000000368 Length:183 Species:Saccharomyces cerevisiae


Alignment Length:178 Identity:57/178 - (32%)
Similarity:97/178 - (54%) Gaps:6/178 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FKSIF---W--KEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWD 71
            |.|:|   |  .:|:.:.::||..:||||.:..:..|:..... ||:|||:..::..|:.:.|||
Yeast     5 FSSMFDKLWGSNKELRILILGLDGAGKTTILYRLQIGEVVTTK-PTIGFNVETLSYKNLKLNVWD 68

  Fly    72 IGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPG 136
            :|||...|..|..|.....|::::||:.|.|::..:..|||.:|.:.:|....:||..||:|.||
Yeast    69 LGGQTSIRPYWRCYYADTAAVIFVVDSTDKDRMSTASKELHLMLQEEELQDAALLVFANKQDQPG 133

  Fly   137 ALDETGLIERMNLSSIQDREICCYSISCKEKDNIDITLQWLIQHSKSQ 184
            ||..:.:.:.:||..::||.....:.|..:.:.|...|.|||...|.:
Yeast   134 ALSASEVSKELNLVELKDRSWSIVASSAIKGEGITEGLDWLIDVIKEE 181

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_001287225.1 Arl10_like 22..180 CDD:206724 51/157 (32%)
ARL1NP_009723.3 Arl1 20..177 CDD:206718 51/157 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG53833
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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