DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Arl8 and ARLA1C

DIOPT Version :10

Sequence 1:NP_649769.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_190556.2 Gene:ARLA1C / 824149 AraportID:AT3G49870 Length:184 Species:Arabidopsis thaliana


Alignment Length:184 Identity:115/184 - (62%)
Similarity:149/184 - (80%) Gaps:0/184 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 LALINRILEWFKSIFWKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVT 66
            :.|:...|.|.:|:|:|:||||:|:|||.:|||:.|||:|:|.::|||||||||||||:|:||||
plant     1 MGLLEAFLNWLRSLFFKQEMELSLIGLQNAGKTSLVNVVATGGYSEDMIPTVGFNMRKVTKGNVT 65

  Fly    67 IKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNK 131
            ||:||:|||||||||||||||.|:||||:|||||.|.|..|::|||.||.|..|.|||:||||||
plant    66 IKLWDLGGQPRFRSMWERYCRAVSAIVYVVDAADPDNLSVSKSELHDLLSKTSLNGIPLLVLGNK 130

  Fly   132 RDLPGALDETGLIERMNLSSIQDREICCYSISCKEKDNIDITLQWLIQHSKSQS 185
            .|.||||.:..|.:.|.|:|:.|||:||:.||||...|||..:.||::||||::
plant   131 IDKPGALSKEALTDEMGLTSLTDREVCCFMISCKNSTNIDQVIDWLVKHSKSKN 184

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_649769.1 Arl10_like 22..180 CDD:206724 103/157 (66%)
ARLA1CNP_190556.2 Arl10_like 21..179 CDD:206724 103/157 (66%)

Return to query results.
Submit another query.