DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl8 and Arl4d

DIOPT Version :10

Sequence 1:NP_649769.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_079680.1 Gene:Arl4d / 80981 MGIID:1933155 Length:201 Species:Mus musculus


Alignment Length:172 Identity:57/172 - (33%)
Similarity:98/172 - (56%) Gaps:19/172 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 EEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKI------TRGNVTIKVWDIGGQPR 77
            :.:.:.::||..:|||:.:..:...:|.:. :||.|||..||      :|| :|.:|||:|||.:
Mouse    20 QALHVVVIGLDSAGKTSLLYRLKFKEFVQS-VPTKGFNTEKIRVPLGGSRG-ITFQVWDVGGQEK 82

  Fly    78 FRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDETG 142
            .|.:|..|.|..:.:|::||:|:.::||.:|.|||.:.......|:|||||.||:|.||||....
Mouse    83 LRPLWRSYTRRTDGLVFVVDSAETERLEEARMELHRISKASDNQGVPVLVLANKQDQPGALSAAE 147

  Fly   143 LIERMNLSSIQDREICCYSIS----CKEKDNIDITLQWLIQH 180
            :.:|:.:     ||:...:::    |...|.:.  ||..::|
Mouse   148 VEKRLAV-----RELAAATLTHVQGCSAVDGLG--LQPGLEH 182

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_649769.1 Arl10_like 22..180 CDD:206724 56/167 (34%)
Arl4dNP_079680.1 Arl4_Arl7 19..201 CDD:206719 57/172 (33%)

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