DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl8 and Arf6

DIOPT Version :10

Sequence 1:NP_649769.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_077066.1 Gene:Arf6 / 79121 RGDID:621279 Length:175 Species:Rattus norvegicus


Alignment Length:169 Identity:59/169 - (34%)
Similarity:96/169 - (56%) Gaps:1/169 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 IFWKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQPRFR 79
            ||..:||.:.::||..:||||.:..:..|| :...|||||||:..:|..||...|||:|||.:.|
  Rat     8 IFGNKEMRILMLGLDAAGKTTILYKLKLGQ-SVTTIPTVGFNVETVTYKNVKFNVWDVGGQDKIR 71

  Fly    80 SMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDETGLI 144
            .:|..|..|...::::||.||.|:::.:|.|||.:::..::....:|:..||:|||.|:....:.
  Rat    72 PLWRHYYTGTQGLIFVVDCADRDRIDEARQELHRIINDREMRDAIILIFANKQDLPDAMKPHEIQ 136

  Fly   145 ERMNLSSIQDREICCYSISCKEKDNIDITLQWLIQHSKS 183
            |::.|:.|:||............|.:...|.||..:.||
  Rat   137 EKLGLTRIRDRNWYVQPSCATSGDGLYEGLTWLTSNYKS 175

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_649769.1 Arl10_like 22..180 CDD:206724 53/157 (34%)
Arf6NP_077066.1 ARF 1..175 CDD:128474 57/167 (34%)

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