DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl8 and sar1b

DIOPT Version :10

Sequence 1:NP_649769.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001015871.1 Gene:sar1b / 548588 XenbaseID:XB-GENE-944209 Length:198 Species:Xenopus tropicalis


Alignment Length:194 Identity:51/194 - (26%)
Similarity:95/194 - (48%) Gaps:22/194 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 ILEWFKSIF---------WKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRG 63
            :..|..|.|         :|:..:|..:||..:||||.:.::..|:..: .:||:.....::|..
 Frog     4 LFSWISSGFSGVLQFLGLYKKTGKLVFLGLDNAGKTTLLQMLKDGRMGQ-YVPTLHPTSEELTIA 67

  Fly    64 NVTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVL 128
            .:|...:|:||..:.|.:|:.|...:|.||:::|.||.|:|..|:.||.:|:....:|.:|:|:|
 Frog    68 GMTFTTFDLGGHTQARRVWKNYLPAINGIVFLIDCADHDRLSESKRELDALMADETIANVPILLL 132

  Fly   129 GNKRDLPGALDETGLIERMNL------------SSIQDREICCYSISCKEKDNIDITLQWLIQH 180
            |||.|.|.|:.|..|:....:            ..:.:|.:..:..|..::.......:||.|:
 Frog   133 GNKIDRPEAISEERLLHLFGIYGQTTGKGKVPQKQLANRPLEVFMCSILKRQGYGEGFRWLSQY 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_649769.1 Arl10_like 22..180 CDD:206724 46/169 (27%)
sar1bNP_001015871.1 Sar1 3..197 CDD:206645 51/194 (26%)

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