DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl8 and arfrp1

DIOPT Version :10

Sequence 1:NP_649769.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:XP_005166227.1 Gene:arfrp1 / 503602 ZFINID:ZDB-GENE-050227-14 Length:201 Species:Danio rerio


Alignment Length:177 Identity:45/177 - (25%)
Similarity:88/177 - (49%) Gaps:9/177 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FKSIFWKEEMELTLVGLQFSGKTTFVNVIAS-------GQFAEDMIPTVGFNMRKITRGNVTIKV 69
            :|.:|.|:|..:.::||..:|||||:....:       |.....:..|||.|:..|..|...:..
Zfish     9 YKYMFQKDEYCILILGLDNAGKTTFLEQTKTRFSKNYKGMNLSKITTTVGLNIGTIDVGKARLMF 73

  Fly    70 WDIGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDL 134
            ||:|||...:|:|::|....:.::|::|:.|.::|..|:|....::....|.|:|:|||.||:|:
Zfish    74 WDLGGQEELQSLWDKYYAESHGVIYVIDSTDEERLGESKNAFEKMISSEALEGVPLLVLANKQDV 138

  Fly   135 PGALDETGLIERMN--LSSIQDREICCYSISCKEKDNIDITLQWLIQ 179
            ...|....:....:  ...|..|:......:......::..::|:::
Zfish   139 ENCLSVPDIKTAFSDCAPKIGKRDCLVQPCAALSGQGVNDGIEWMVK 185

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_649769.1 Arl10_like 22..180 CDD:206724 41/167 (25%)
arfrp1XP_005166227.1 Arfrp1 19..186 CDD:206725 41/167 (25%)

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