DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl8 and arf4a

DIOPT Version :10

Sequence 1:NP_649769.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001003590.1 Gene:arf4a / 445196 ZFINID:ZDB-GENE-040801-109 Length:180 Species:Danio rerio


Alignment Length:166 Identity:49/166 - (29%)
Similarity:92/166 - (55%) Gaps:1/166 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 FKSIFWKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQP 76
            |..:|.|::|.:.:|||..:||||.:..:..|:.. ..|||:|||:..:...|::..|||:|||.
Zfish     9 FSRLFGKKQMRILMVGLDAAGKTTILYKLKLGEIV-TTIPTIGFNVETVEYKNISFTVWDVGGQD 72

  Fly    77 RFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDET 141
            :.|.:|..|.:....::::||:.|.::.:.|..||..:|.:.:|....:|:..||:|||.|:..:
Zfish    73 KIRPLWRHYFQNTQGLIFVVDSNDRERAQESAEELQKMLQEDELRDAVLLIFANKQDLPNAMPIS 137

  Fly   142 GLIERMNLSSIQDREICCYSISCKEKDNIDITLQWL 177
            .|.:::.|.:::.|.....:....:...:...|.||
Zfish   138 ELTDKLGLQNLRSRTWYVQAACATQGTGLYEGLDWL 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_649769.1 Arl10_like 22..180 CDD:206724 45/156 (29%)
arf4aNP_001003590.1 P-loop containing Nucleoside Triphosphate Hydrolases 1..180 CDD:476819 49/166 (30%)

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