DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl8 and Arl4

DIOPT Version :9

Sequence 1:NP_001287225.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_001245408.1 Gene:Arl4 / 43771 FlyBaseID:FBgn0039889 Length:313 Species:Drosophila melanogaster


Alignment Length:137 Identity:46/137 - (33%)
Similarity:79/137 - (57%) Gaps:6/137 - (4%)


- Green bases have known domain annotations that are detailed below.


  Fly    21 MELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKI--TRG---NVTIKVWDIGGQPRFRS 80
            :.:.::||..:||||.:..:...|:. :.:||:|||..|:  |.|   .|...|||:|||.:.|.
  Fly    26 LHVVMLGLDSAGKTTALYRLKFDQYL-NTVPTIGFNCEKVQCTLGKAKGVHFLVWDVGGQEKLRP 89

  Fly    81 MWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDETGLIE 145
            :|..|.|..:.|::::|:.|.:::|.::.||......|...|:|||:|.||:|||.|.....|.:
  Fly    90 LWRSYTRCTDGILFVIDSVDTERMEEAKMELMRTAKCPDNQGVPVLILANKQDLPNACGAMELEK 154

  Fly   146 RMNLSSI 152
            .:.|:.:
  Fly   155 LLGLNEL 161

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_001287225.1 Arl10_like 22..180 CDD:206724 46/136 (34%)
Arl4NP_001245408.1 P-loop_NTPase 24..311 CDD:304359 46/137 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455873
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
10.930

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