DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl8 and Arl2

DIOPT Version :9

Sequence 1:NP_001287225.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_476886.1 Gene:Arl2 / 40993 FlyBaseID:FBgn0004908 Length:184 Species:Drosophila melanogaster


Alignment Length:161 Identity:57/161 - (35%)
Similarity:92/161 - (57%) Gaps:1/161 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    18 KEEMELTLVGLQFSGKTTFVNVIASGQFAEDMIPTVGFNMRKITRGNVTIKVWDIGGQPRFRSMW 82
            :.||.:.|:||..:||||.:... :|:..:.:.||:|||::.:.....|:.:||:|||...||.|
  Fly    14 EREMRILLLGLDNAGKTTILKRF-NGEPIDTISPTLGFNIKTLEHNGYTLNMWDVGGQKSLRSYW 77

  Fly    83 ERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLGNKRDLPGALDETGLIERM 147
            ..|....:.:|::||:||..:||:...||..||.:.:|||..:|||.||:||||||....:.|.:
  Fly    78 RNYFESTDGLVWVVDSADRMRLESCGQELQVLLQEERLAGATLLVLCNKQDLPGALSSNEIKEIL 142

  Fly   148 NLSSIQDREICCYSISCKEKDNIDITLQWLI 178
            :|..|.........:|....:.:..::.|||
  Fly   143 HLEDITTHHWLVAGVSAVTGEKLLSSMDWLI 173

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_001287225.1 Arl10_like 22..180 CDD:206724 55/157 (35%)
Arl2NP_476886.1 Arl2 3..175 CDD:206720 57/161 (35%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455901
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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