DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl8 and Arl5

DIOPT Version :9

Sequence 1:NP_001287225.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_648201.1 Gene:Arl5 / 38931 FlyBaseID:FBgn0035866 Length:179 Species:Drosophila melanogaster


Alignment Length:189 Identity:54/189 - (28%)
Similarity:100/189 - (52%) Gaps:21/189 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LINRILEWFKSIFWKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMI----PTVGFNMRKITRGN 64
            |::|:  |  .:|..||.:|.:|||..:||||.:.     ||..:.:    ||:|.|:.::...|
  Fly     4 LLSRL--W--RMFGNEEHKLVMVGLDNAGKTTILY-----QFLMNEVVHTSPTIGSNVEEVVWRN 59

  Fly    65 VTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLG 129
            :...|||:|||...|:.|..|......::.::|:.|.::|..:|.||:.:|....|:...:||..
  Fly    60 IHFLVWDLGGQQSLRAAWSTYYTNTELVIMVIDSTDRERLAVTREELYRMLQHEDLSKASLLVYA 124

  Fly   130 NKRDLPGALDETGLIERMNLSSIQDR----EICCYSISCKEKDNIDITLQWLIQHSKSQ 184
            ||:||.|::....:..:::|:||:..    :.||    ....:.:...|:|::|..|::
  Fly   125 NKQDLKGSMSAAEISRQLDLTSIKKHQWHIQACC----ALTGEGLYQGLEWIVQRIKNK 179

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_001287225.1 Arl10_like 22..180 CDD:206724 46/165 (28%)
Arl5NP_648201.1 Arl5_Arl8 3..175 CDD:133353 52/183 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45455899
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
21.840

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