DRSC/TRiP Functional Genomics Resources

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Protein Alignment Arl8 and Arl5c

DIOPT Version :10

Sequence 1:NP_649769.1 Gene:Arl8 / 40961 FlyBaseID:FBgn0037551 Length:186 Species:Drosophila melanogaster
Sequence 2:NP_997114.1 Gene:Arl5c / 217151 MGIID:3028577 Length:179 Species:Mus musculus


Alignment Length:182 Identity:49/182 - (26%)
Similarity:90/182 - (49%) Gaps:21/182 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 LINRILEWFKSIFWKEEMELTLVGLQFSGKTTFVNVIASGQFAEDMI----PTVGFNMRKITRGN 64
            ||.:::.    ||..:|.::.:|||..:||||.:.     ||..:.:    .|:|.|:.:|....
Mouse     4 LIAKLMR----IFGSQEHKVIIVGLDNAGKTTILY-----QFLTNEVVHTCSTIGSNVEEIVLRK 59

  Fly    65 VTIKVWDIGGQPRFRSMWERYCRGVNAIVYMVDAADLDKLEASRNELHSLLDKPQLAGIPVLVLG 129
            ....:||:|||...||.|:.|......::.::|:.|.::|..:|.||:.:|....|....||:..
Mouse    60 THFLMWDLGGQEALRSTWDTYYSNAEFVILVIDSTDRNRLLTTREELYKMLAHEALQNASVLIFA 124

  Fly   130 NKRDLPGALDETGLIERMNLSSIQDR----EICCYSISCKEKDNIDITLQWL 177
            ||:|:..::....:.:.:.||:|:|.    :.||    ....:.:...|||:
Mouse   125 NKQDVKDSMTTAEISQFLTLSAIKDHPWHIQGCC----ALTGEGLPAGLQWM 172

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Arl8NP_649769.1 Arl10_like 22..180 CDD:206724 44/164 (27%)
Arl5cNP_997114.1 Arl5_Arl8 3..172 CDD:133353 48/180 (27%)

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